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mbX: A Microbiome Data Cleaning and Visualization Package
In mbX: A Comprehensive Microbiome Data Processing Pipeline
Introduction
The mbX package provides functions for cleaning and visualizing microbiome data. This vignette demonstrates how to use ezclean() and ezviz() to transform and visualize your data.
Data Cleaning with ezclean()
```r
file_mic <- system.file("extdata", "microbiome.csv", package = "mbX")
file_meta <- system.file("extdata", "metadata.csv", package = "mbX")
cleaned_data <- mbX::ezclean(file_mic, file_meta, "genus", 10)
head(cleaned_data)
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mbX documentation built on April 3, 2025, 8:59 p.m.
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Introduction
The mbX package provides functions for cleaning and visualizing microbiome data. This vignette demonstrates how to use ezclean() and ezviz() to transform and visualize your data.
Data Cleaning with ezclean()
```r file_mic <- system.file("extdata", "microbiome.csv", package = "mbX") file_meta <- system.file("extdata", "metadata.csv", package = "mbX") cleaned_data <- mbX::ezclean(file_mic, file_meta, "genus", 10) head(cleaned_data)
Try the mbX package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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