mcmcplots: Create Plots from MCMC Output

Share:

Functions for convenient plotting and viewing of MCMC output.

Author
S. McKay Curtis [aut, cre], Ilya Goldin [ctb], Evangelos Evangelou [ctb], 'sumtxt' from GitHub [ctb]
Date of publication
2015-03-19 06:47:34
Maintainer
S. McKay Curtis <s.mckay.curtis@gmail.com>
License
GPL (>= 2)
Version
0.4.2

View on CRAN

Man pages

as.mcmc.bugs
Convert a bugs Object to an mcmc or mcmc.list Object
as.mcmc.rjags
Convert an rjags Object to an mcmc or mcmc.list Object.
autplot1
Autocorrelation Plot of MCMC Output
caterplot
Caterpillar Plots of MCMC Output
caterpoints
Points on a "caterplot"
convert.mcmc.list
Convert an object to mcmc.list object
corplot
Plot a Correlation Matrix
denoverplot
Overlaying Densities for Parameters from two MCMC...
denoverplot1
Plot Overlaying Densities
denplot
Density Plots for MCMC Parameters on a Single Plot
graypr
Create a Gray Plotting Region
html.begin
Initialize an html file for use in the mcmcplot function.
html.end
Complete the html file for use in mcmcplot
html.img
Insert an image into an html file
mcmcplot
Diagnostics Plots for MCMC in HTML format
mcmcplot1
MCMC Diagnostics Plots for one Model Parameter
mcmcplots-package
Plots for MCMC Output
mcmcplotsPalette
Color Palette for the mcmcplots Package
parcorplot
Correlation Plot for MCMC Draws of Model Parameters
parms2plot
Matches groups of parameters to plot in MCMC diagnostics...
rmeanplot
Running Mean Plots of Multiple Parameters
rmeanplot1
Running Mean Plot for a Single Parameter in MCMC Output
to.greek
Parse strings containing names of greek letters.
traplot
Traceplots of Multiple Parameters.
traplot1
Trace Plot for a Single Parameter in MCMC Output

Files in this package

mcmcplots
mcmcplots/inst
mcmcplots/inst/MCMCoutput.css
mcmcplots/NAMESPACE
mcmcplots/NEWS
mcmcplots/R
mcmcplots/R/mcmcplot1.R
mcmcplots/R/html.begin.R
mcmcplots/R/rmeanplot.R
mcmcplots/R/html.img.R
mcmcplots/R/autplot1.R
mcmcplots/R/rmeanplot1.R
mcmcplots/R/parms2plot.R
mcmcplots/R/convert.mcmc.list.R
mcmcplots/R/caterpoints.R
mcmcplots/R/parcorplot.R
mcmcplots/R/corplot.R
mcmcplots/R/denplot.R
mcmcplots/R/traplot1.R
mcmcplots/R/as.mcmc.bugs.R
mcmcplots/R/traplot.R
mcmcplots/R/as.mcmc.rjags.R
mcmcplots/R/caterplot.R
mcmcplots/R/to.greek.R
mcmcplots/R/html.end.R
mcmcplots/R/mcmcplotsPalette.R
mcmcplots/R/denoverplot1.R
mcmcplots/R/denoverplot.R
mcmcplots/R/graypr.R
mcmcplots/R/mcmcplot.R
mcmcplots/MD5
mcmcplots/DESCRIPTION
mcmcplots/man
mcmcplots/man/caterpoints.Rd
mcmcplots/man/mcmcplots-package.Rd
mcmcplots/man/html.img.Rd
mcmcplots/man/to.greek.Rd
mcmcplots/man/as.mcmc.bugs.Rd
mcmcplots/man/caterplot.Rd
mcmcplots/man/html.begin.Rd
mcmcplots/man/autplot1.Rd
mcmcplots/man/traplot.Rd
mcmcplots/man/traplot1.Rd
mcmcplots/man/mcmcplot1.Rd
mcmcplots/man/denoverplot1.Rd
mcmcplots/man/parcorplot.Rd
mcmcplots/man/denplot.Rd
mcmcplots/man/convert.mcmc.list.Rd
mcmcplots/man/html.end.Rd
mcmcplots/man/mcmcplot.Rd
mcmcplots/man/corplot.Rd
mcmcplots/man/as.mcmc.rjags.Rd
mcmcplots/man/denoverplot.Rd
mcmcplots/man/mcmcplotsPalette.Rd
mcmcplots/man/rmeanplot.Rd
mcmcplots/man/graypr.Rd
mcmcplots/man/rmeanplot1.Rd
mcmcplots/man/parms2plot.Rd