classres: Results of classification

Description Usage Arguments Details Value See Also

View source: R/classres.R

Description

classres is used to store results classification for one or multiple classes.

Usage

1
classres(c.pred, c.ref = NULL, p.pred = NULL, ncomp.selected = 1)

Arguments

c.pred

matrix with predicted values (+1 or -1) for each class.

c.ref

matrix with reference values for each class.

p.pred

matrix with probability values for each class.

ncomp.selected

vector with selected number of components for each class.

Details

There is no need to create a classres object manually, it is created automatically when build a classification model (e.g. using simca or plsda) or apply the model to new data. For any classification method from mdatools, a class using to represent results of classification (e.g. simcares) inherits fields and methods of classres.

Value

c.pred

predicted class values (+1 or -1).

p.pred

predicted class probabilities.

c.ref

reference (true) class values if provided.

The following fields are available only if reference values were provided.

tp

number of true positives.

tn

number of true negatives.

fp

nmber of false positives.

fn

number of false negatives.

specificity

specificity of predictions.

sensitivity

sensitivity of predictions.

misclassified

ratio of misclassified objects.

See Also

Methods classres class:

showPredictions.classres shows table with predicted values.
plotPredictions.classres makes plot with predicted values.
plotSensitivity.classres makes sn plot.
plotSpecificity.classres makes specificity plot.
plotMisclassified.classres makes ms ratio plot.
plotPerformance.classres makes plot with misclassified ratio, specificity and sensitivity values.

mdatools documentation built on Sept. 13, 2021, 9:07 a.m.