mefa: Multivariate Data Handling in Ecology and Biogeography

A framework package aimed to provide standardized computational environment for specialist work via object classes to represent the data coded by samples, taxa and segments (i.e. subpopulations, repeated measures). It supports easy processing of the data along with cross tabulation and relational data tables for samples and taxa. An object of class `mefa' is a project specific compendium of the data and can be easily used in further analyses. Methods are provided for extraction, aggregation, conversion, plotting, summary and reporting of `mefa' objects. Reports can be generated in plain text or LaTeX format. Vignette contains worked examples.

AuthorPeter Solymos
Date of publication2016-01-12 00:26:03
MaintainerPeter Solymos <solymos@ualberta.ca>
LicenseGPL-2
Version3.2-7
https://github.com/psolymos/mefa

View on CRAN

Files in this package

mefa
mefa/inst
mefa/inst/CITATION
mefa/inst/ChangeLog
mefa/inst/doc
mefa/inst/doc/mefa.Rnw
mefa/inst/doc/mefa.pdf
mefa/inst/doc/mefa.R
mefa/inst/SampleReport
mefa/tests
mefa/tests/tests.R
mefa/NAMESPACE
mefa/demo
mefa/demo/00Index
mefa/demo/mefa.R
mefa/data
mefa/data/dol.taxa.rda
mefa/data/dol.samp.rda
mefa/data/dol.count.rda
mefa/R
mefa/R/as.list.mefa.R mefa/R/msr.R mefa/R/stack.dist.R mefa/R/summary.stcs.R mefa/R/taxa.R mefa/R/as.mefa.default.R mefa/R/mefaNestedless.R mefa/R/print.mefa.R mefa/R/is.dist.R mefa/R/is.stcs.R mefa/R/plot.mefa.R mefa/R/as.stcs.R mefa/R/fill.na.R mefa/R/mss.R mefa/R/rep.data.frame.R mefa/R/as.matrix.mefa.R mefa/R/report.R mefa/R/mfill.R mefa/R/plot.stcs.R mefa/R/as.data.frame.stcs.R mefa/R/label.R mefa/R/report.mefa.R mefa/R/rdrop.R mefa/R/mefaCheck.R mefa/R/summary.mefa.R mefa/R/aggregate.mefa.R mefa/R/melt.mefa.R mefa/R/as.array.mefa.R mefa/R/print.summary.mefa.R mefa/R/aoplot.default.R mefa/R/xtab.default.R mefa/R/cdrop.R mefa/R/mefalogo.R mefa/R/as.mefa.list.R mefa/R/taxa.default.R mefa/R/mefadocs.R mefa/R/image.stcs.R mefa/R/stcs.R mefa/R/mat2list.R mefa/R/dimnames.mefa.R mefa/R/mefaweb.R mefa/R/melt.R mefa/R/mts.R mefa/R/segm.default.R mefa/R/segm.R mefa/R/mefaTables.R mefa/R/samp.R mefa/R/image.mefa.R mefa/R/coercionMethodsForMefa4.R mefa/R/mtr.R mefa/R/aoplot.R mefa/R/xtab.R mefa/R/image.dist.R mefa/R/is.mefa.R mefa/R/vec2dist.R mefa/R/as.mefa.array.R mefa/R/boxplot.stcs.R mefa/R/dim.mefa.R mefa/R/mefaCrosstab.R mefa/R/boxplot.mefa.R mefa/R/qvector.R mefa/R/mefaCompare.R mefa/R/samp.default.R mefa/R/mefa.R mefa/R/zzz.R mefa/R/as.mefa.R mefa/R/as.data.frame.mefa.R mefa/R/extract.mefa.R mefa/R/as.stcs.default.R
mefa/vignettes
mefa/vignettes/mefa.Rnw
mefa/vignettes/mefa.bib
mefa/MD5
mefa/build
mefa/build/vignette.rds
mefa/DESCRIPTION
mefa/man
mefa/man/mefaCheck.Rd mefa/man/report.mefa.Rd mefa/man/plot.mefa.Rd mefa/man/mefaNestedless.Rd mefa/man/mat2list.Rd mefa/man/aoplot.Rd mefa/man/mefaweb.Rd mefa/man/aggregate.mefa.Rd mefa/man/dolina.Rd mefa/man/mefaTables.Rd mefa/man/stcs.Rd mefa/man/fill.na.Rd mefa/man/rep.data.frame.Rd mefa/man/stack.dist.Rd mefa/man/mefa.Rd mefa/man/melt.mefa.Rd mefa/man/qvector.Rd mefa/man/label.Rd mefa/man/mefaCrosstab.Rd mefa/man/mefadocs.Rd mefa/man/as.mefa.Rd mefa/man/image.dist.Rd mefa/man/mefalogo.Rd

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