get_tree_mammal_n100_phylacine: Get 100 randomly selected mega-trees of Mammals from...
In megatrees: Subsets of Randomly Selected Phylogenies from Existing Mega-Phylogenies
View source: R/get_large_trees.R
get_tree_mammal_n100_phylacine R Documentation
Get 100 randomly selected mega-trees of Mammals from PHYLACINE V1.2
Description
These 100 phylogenies are randomly selected from the 1000 trees generated
by Faurby et al. (2018). Because of the large file size (~6 MB), this
dataset is not bundled with the package and is downloaded and cached locally
on first use.
Usage
get_tree_mammal_n100_phylacine(force = FALSE)
Arguments
force
Logical. Re-download even if a local cache exists. Default FALSE.
Value
A multiPhylo object. Each phylogeny also has a data frame
genus_family_root with root node information for every unique genus
and family, usable for inserting new tips onto the phylogeny.
Source
https://github.com/MegaPast2Future/PHYLACINE_1.2/blob/master/Data/Phylogenies/Complete_phylogeny.nex
References
Faurby, S., Davis, M., Pedersen, R. Ø., Schowanek, S. D.,
Antonelli, A., & Svenning, J. C. (2018). PHYLACINE 1.2: The phylogenetic
atlas of mammal macroecology. Ecology, 99(11), 2626-2626.
See Also
get_tree_mammal_n100_vertlife
megatrees documentation built on June 29, 2026, 5:06 p.m.
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View source: R/get_large_trees.R
| get_tree_mammal_n100_phylacine | R Documentation |
Get 100 randomly selected mega-trees of Mammals from PHYLACINE V1.2
Description
These 100 phylogenies are randomly selected from the 1000 trees generated by Faurby et al. (2018). Because of the large file size (~6 MB), this dataset is not bundled with the package and is downloaded and cached locally on first use.
Usage
get_tree_mammal_n100_phylacine(force = FALSE)
Arguments
force |
Logical. Re-download even if a local cache exists. Default FALSE. |
Value
A multiPhylo object. Each phylogeny also has a data frame
genus_family_root with root node information for every unique genus
and family, usable for inserting new tips onto the phylogeny.
Source
https://github.com/MegaPast2Future/PHYLACINE_1.2/blob/master/Data/Phylogenies/Complete_phylogeny.nex
References
Faurby, S., Davis, M., Pedersen, R. Ø., Schowanek, S. D., Antonelli, A., & Svenning, J. C. (2018). PHYLACINE 1.2: The phylogenetic atlas of mammal macroecology. Ecology, 99(11), 2626-2626.
See Also
get_tree_mammal_n100_vertlife
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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