meta4diag: Meta-Analysis for Diagnostic Test Studies

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Bayesian inference analysis for bivariate meta-analysis of diagnostic test studies using integrated nested Laplace approximation with INLA. A purpose built graphic user interface is available. The installation of R package INLA is compulsory for successful usage. The INLA package can be obtained from <http://www.r-inla.org>. We recommend the testing version, which can be downloaded by running: install.packages("INLA", repos="http://www.math.ntnu.no/inla/R/testing").

Author
Jingyi Guo <jingyi.guo@math.ntnu.no> and Andrea Riebler <andrea.riebler@math.ntnu.no>
Date of publication
2016-07-06 17:47:31
Maintainer
Jingyi Guo <jingyi.guo@math.ntnu.no>
License
GPL
Version
2.0.5

View on CRAN

Man pages

AUC
A function that calculate the area under summary receiver...
Catheter
The Catheter Segment Culture data.
crosshair
Crosshair Plot.
fitted
Get the estimated values of accuracies for each study.
forest
Forest plot.
funnel
Funnel plot.
makeData
Make internally used data structure.
makeObject
A function used to make a 'meta4diag' object.
makePriors
Priors for internal use.
meta4diag
Function to analyse diagnostic meta-analysis with Bayesian...
meta4diagGUI
A graphic user interface for meta4diag.
plot
Default meta4diag plotting.
print
print meta4diag object.
runModel
Run the bivariate model.
Scheidler
Scheidler dataset.
SROC
A standard summary receiver operating chracteristic plot.
summary
Provide summary information.
table_cor
The example table prior for correlation.
table_var
The example table prior for variance.
Telomerase
Telomerase dataset.

Files in this package

meta4diag
meta4diag/inst
meta4diag/inst/meta4diagGUI
meta4diag/inst/meta4diagGUI/server.R
meta4diag/inst/meta4diagGUI/www
meta4diag/inst/meta4diagGUI/www/index.html
meta4diag/inst/meta4diagGUI/www/shared
meta4diag/inst/meta4diagGUI/www/shared/css
meta4diag/inst/meta4diagGUI/www/shared/css/popup_style.css
meta4diag/inst/meta4diagGUI/www/shared/css/accordion_style.css
meta4diag/inst/meta4diagGUI/www/shared/css/comemnts_code.html
meta4diag/inst/meta4diagGUI/www/shared/css/jqmath-0.4.3.css
meta4diag/inst/meta4diagGUI/www/shared/css/main_notebook_style.css
meta4diag/inst/meta4diagGUI/www/shared/css/sidebar_style.css
meta4diag/inst/meta4diagGUI/www/shared/css/leftbar_sideway_style.css
meta4diag/inst/meta4diagGUI/www/shared/js
meta4diag/inst/meta4diagGUI/www/shared/js/jqmath-etc-0.4.3.min.js
meta4diag/inst/meta4diagGUI/www/shared/js/ASCIIMathML.js
meta4diag/inst/meta4diagGUI/www/shared/js/jquery-1.4.3.js
meta4diag/inst/meta4diagGUI/www/shared/js/jscolor.js
meta4diag/inst/meta4diagGUI/www/shared/js/accordion.js
meta4diag/inst/meta4diagGUI/www/shared/js/jqmath-0.4.3.js
meta4diag/inst/meta4diagGUI/www/shared/js/jscurry-0.4.0.min.js
meta4diag/inst/meta4diagGUI/www/shared/js/jscolor.min.js
meta4diag/inst/meta4diagGUI/www/shared/js/validation_numeric.js
meta4diag/inst/meta4diagGUI/www/shared/js/jscurry-0.4.0.js
meta4diag/inst/meta4diagGUI/www/shared/js/jquery-1.4.3.min.js
meta4diag/inst/meta4diagGUI/www/img
meta4diag/inst/meta4diagGUI/www/img/arrow-up.png
meta4diag/inst/meta4diagGUI/www/img/welcome2.png
meta4diag/inst/meta4diagGUI/www/img/icon_data.png
meta4diag/inst/meta4diagGUI/www/img/welcome1.png
meta4diag/inst/meta4diagGUI/www/img/icon_prior.png
meta4diag/inst/meta4diagGUI/www/img/icon_model.png
meta4diag/inst/meta4diagGUI/www/img/sroctype5.png
meta4diag/inst/meta4diagGUI/www/img/lty5.png
meta4diag/inst/meta4diagGUI/www/img/arrow-down.png
meta4diag/inst/meta4diagGUI/www/img/welcome3.png
meta4diag/inst/meta4diagGUI/www/img/lty1.png
meta4diag/inst/meta4diagGUI/www/img/sroctype3.png
meta4diag/inst/meta4diagGUI/www/img/lty3.png
meta4diag/inst/meta4diagGUI/www/img/icon_result.png
meta4diag/inst/meta4diagGUI/www/img/sroctype1.png
meta4diag/inst/meta4diagGUI/www/img/lty4.png
meta4diag/inst/meta4diagGUI/www/img/lty2.png
meta4diag/inst/meta4diagGUI/www/img/sroctype2.png
meta4diag/inst/meta4diagGUI/www/img/sroctype4.png
meta4diag/inst/meta4diagGUI/www/img/icon_clover.png
meta4diag/inst/meta4diagGUI/www/img/lty6.png
meta4diag/inst/meta4diagGUI/www/img/icon_clover2.png
meta4diag/inst/image
meta4diag/inst/image/linewidth2.png
meta4diag/inst/image/sidebar_prior_title.gif
meta4diag/inst/image/pcex3.png
meta4diag/inst/image/sidebar_data_title.gif
meta4diag/inst/image/linewidth6.png
meta4diag/inst/image/refresh.png
meta4diag/inst/image/linetype2.png
meta4diag/inst/image/linewidth5.png
meta4diag/inst/image/linetype4.png
meta4diag/inst/image/pch3.png
meta4diag/inst/image/linewidth4.png
meta4diag/inst/image/pointtype1.png
meta4diag/inst/image/linetype1.png
meta4diag/inst/image/sidebar_funnel_title.gif
meta4diag/inst/image/pch1.png
meta4diag/inst/image/pcex1.png
meta4diag/inst/image/linetype6.png
meta4diag/inst/image/linetype5.png
meta4diag/inst/image/search.png
meta4diag/inst/image/linewidth1.png
meta4diag/inst/image/sidebar_title.png
meta4diag/inst/image/sidebar_sroc_title.gif
meta4diag/inst/image/linetype3.png
meta4diag/inst/image/sidebar_forest_title.gif
meta4diag/inst/image/pch2.png
meta4diag/inst/image/sidebar_model_title.gif
meta4diag/inst/image/pcex2.png
meta4diag/inst/image/linewidth3.png
meta4diag/inst/etc
meta4diag/inst/etc/ui.xml
meta4diag/inst/etc/welcometext.txt
meta4diag/inst/txt
meta4diag/inst/txt/Catheter.txt
meta4diag/inst/txt/Telomerase.txt
meta4diag/NAMESPACE
meta4diag/demo
meta4diag/demo/00Index
meta4diag/demo/Catheter.R
meta4diag/data
meta4diag/data/Telomerase.rda
meta4diag/data/Catheter.rda
meta4diag/data/Scheidler.rda
meta4diag/data/table_cor.rda
meta4diag/data/table_var.rda
meta4diag/R
meta4diag/R/makePriors.R
meta4diag/R/plot.R
meta4diag/R/crosshair.R
meta4diag/R/AUC.R
meta4diag/R/makeData.R
meta4diag/R/fitted.R
meta4diag/R/meta4diagGUI.R
meta4diag/R/runModel.R
meta4diag/R/funnel.R
meta4diag/R/meta4diag.R
meta4diag/R/print.R
meta4diag/R/makeObject.R
meta4diag/R/SROC.R
meta4diag/R/summary.R
meta4diag/R/forest.grid.R
meta4diag/R/uuu.R
meta4diag/R/zzz.R
meta4diag/R/forest.R
meta4diag/MD5
meta4diag/DESCRIPTION
meta4diag/man
meta4diag/man/forest.Rd
meta4diag/man/SROC.Rd
meta4diag/man/meta4diag.Rd
meta4diag/man/Scheidler.Rd
meta4diag/man/AUC.Rd
meta4diag/man/makePriors.Rd
meta4diag/man/Telomerase.Rd
meta4diag/man/funnel.Rd
meta4diag/man/meta4diagGUI.Rd
meta4diag/man/runModel.Rd
meta4diag/man/table_var.Rd
meta4diag/man/crosshair.Rd
meta4diag/man/makeObject.Rd
meta4diag/man/table_cor.Rd
meta4diag/man/fitted.Rd
meta4diag/man/Catheter.Rd
meta4diag/man/print.Rd
meta4diag/man/makeData.Rd
meta4diag/man/plot.Rd
meta4diag/man/summary.Rd