Man pages for metamicrobiomeR
Analysis of Microbiome Relative Abundance Data using Zero Inflated Beta GAMLSS and Meta-Analysis Across Studies using Random Effects Model

alpha.compareCompare multiple alpha diversity indexes between groups
alphadatAlpha diversity data.
asum4Combined alpha diversity data for meta-analysis.
covar.rmCovariate data.
gtab.3studTest datasets for microbiome age prediction.
kegg.12Pathway abundance data.
meta.niceplotNice meta-analysis plots.
metatab.showDisplay meta-analysis results.
meta.taxaMeta-analysis of taxa/pathway abundance comparison.
microbiomeagePredict microbiome age.
pathway.compareCompare (kegg) pathway abundance
read.multiRead multiple files
tabsex4Combined data for meta-analysis.
taxa.compareCompare taxa relative abundance
taxa.filterFilter relative abundance data
taxa.mean.plotPlot mean taxa abundance
taxa.meansdnSummarize abundance by group
taxcomtab.showDisplay abundance comparison results.
taxtab6Taxonomic relative abundance data.
metamicrobiomeR documentation built on Sept. 3, 2019, 9:04 a.m.