Files in metamorphr

Tidy and Streamlined Metabolomics Data Workflows

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

LICENSE

R/sysdata.rda

R/normalize.R R/scale.R R/utils-pipe.R R/filters.R R/transform.R R/data.R R/internal_functions.R R/plot.R R/collapse.R R/misc.R R/imputes.R R/metamorphr-package.R R/convert.R R/io.R R/msn.R inst/doc/conjugate-screening.R

inst/doc/metamorphr.html

inst/doc/metamorphr.R

inst/doc/conjugate-screening.html

inst/doc/metamorphr.Rmd inst/doc/conjugate-screening.Rmd

inst/extdata/toy_metaboscape.csv

inst/extdata/toy_mzmine.csv

inst/extdata/toy_mgf.mgf

build/vignette.rds

build/partial.rdb

tests/testthat.R tests/testthat/test-impute_min.R tests/testthat/test-internal_prep_pca_imputes.R tests/testthat/test-plot_volcano.R tests/testthat/test-scale_range.R tests/testthat/test-impute_lls.R tests/testthat/test-filter_neutral_loss.R tests/testthat/test-formula_to_mass.R tests/testthat/test-create_metadata_skeleton.R tests/testthat/test-convert_from_wide.R tests/testthat/test-impute_global_lowest.R tests/testthat/test-impute_knn.R tests/testthat/test-filter_global_mv.R tests/testthat/test-read_mgf.R tests/testthat/test-collapse_mean.R tests/testthat/test-normalize_quantile_smooth.R tests/testthat/test-remove_empty_cols.R tests/testthat/test-filter_blank.R tests/testthat/test-normalize_ref.R tests/testthat/test-convert_from_matrix.R tests/testthat/test-normalize_median.R tests/testthat/test-normalize_quantile_batch.R tests/testthat/test-read_featuretable_mzmine.R tests/testthat/test-impute_user_value.R tests/testthat/test-normalize_factor.R tests/testthat/test-filter_mz.R tests/testthat/test-scale_center.R tests/testthat/test-collapse_max.R tests/testthat/test-calc_neutral_loss.R tests/testthat/test-normalize_quantile_all.R tests/testthat/test-impute_median.R tests/testthat/test-filter_msn.R tests/testthat/test-scale_level.R tests/testthat/test-impute_bpca.R tests/testthat/test-normalize_quantile_group.R tests/testthat/test-scale_vast.R tests/testthat/test-calc_kmd.R tests/testthat/test-transform_log.R tests/testthat/test-normalize_sum.R tests/testthat/test-impute_rf.R tests/testthat/test-normalize_pqn.R tests/testthat/test-scale_vast_grouped.R tests/testthat/test-scale_pareto.R tests/testthat/test-scale_auto.R tests/testthat/test-normalize_cyclic_loess.R tests/testthat/test-transform_power.R tests/testthat/test-impute_svd.R tests/testthat/test-collapse_median.R tests/testthat/test-impute_nipals.R tests/testthat/test-msn_scale.R tests/testthat/test-summary_featuretable.R tests/testthat/test-filter_grouped_mv.R tests/testthat/test-impute_mean.R tests/testthat/test-impute_ppca.R tests/testthat/test-filter_cv.R tests/testthat/test-read_featuretable.R tests/testthat/test-plot_pca.R tests/testthat/test-collapse_min.R

tests/testthat/data/test_read_featuretable.tsv

tests/testthat/data/test_filter_msn_nl.mgf

tests/testthat/data/test_read_featuretable_no_metadata.csv

tests/testthat/data/test_read_mgf.mgf

tests/testthat/data/test_read_featuretable_empty_cols.csv

tests/testthat/data/test_read_featuretable_mzmine_no_empty_cols.csv

tests/testthat/data/test_read_featuretable.csv

tests/testthat/data/test_read_mgf_tab.mgf

vignettes/metamorphr.Rmd vignettes/conjugate-screening.Rmd

data/toy_mgf.rda

data/atoms.rda

data/toy_metaboscape.rda

data/toy_metaboscape_metadata.rda

man/transform_power.Rd man/filter_neutral_loss.Rd man/convert_from_matrix.Rd man/impute_bpca.Rd man/normalize_quantile_all.Rd man/scale_center.Rd man/normalize_quantile_batch.Rd man/formula_to_mass.Rd man/filter_mz.Rd man/normalize_quantile_group.Rd man/calc_nominal_km.Rd man/filter_cv.Rd man/plot_volcano.Rd man/scale_level.Rd man/calc_km.Rd man/impute_lod.Rd man/plot_pca.Rd man/scale_vast_grouped.Rd man/scale_auto.Rd man/collapse_mean.Rd man/create_metadata_skeleton.Rd man/read_mgf.Rd man/normalize_ref.Rd man/collapse_max.Rd man/normalize_quantile_smooth.Rd man/calc_kmd.Rd man/impute_ppca.Rd man/join_metadata.Rd man/normalize_factor.Rd man/impute_user_value.Rd man/impute_nipals.Rd man/convert_from_wide.Rd man/toy_mgf.Rd man/impute_svd.Rd man/impute_global_lowest.Rd man/collapse_min.Rd man/msn_calc_nl.Rd man/atoms.Rd man/scale_pareto.Rd man/impute_median.Rd man/normalize_cyclic_loess.Rd man/toy_metaboscape_metadata.Rd man/read_featuretable.Rd man/normalize_pqn.Rd man/pipe.Rd man/read_featuretable_mzmine.Rd man/normalize_median.Rd man/normalize_sum.Rd man/filter_msn.Rd man/collapse_median.Rd man/filter_global_mv.Rd man/metamorphr-package.Rd man/filter_blank.Rd man/msn_scale.Rd man/impute_lls.Rd man/filter_grouped_mv.Rd man/impute_mean.Rd man/summary_featuretable.Rd man/calc_neutral_loss.Rd man/scale_range.Rd man/impute_knn.Rd man/transform_log.Rd man/remove_empty_cols.Rd man/impute_min.Rd man/scale_vast.Rd man/toy_metaboscape.Rd man/impute_rf.Rd

man/figures/README-example-workflow-1.svg

man/figures/README-example-dplyr-2-1.png

man/figures/README-example-dplyr-1-1.svg

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/figures/logo.png

man/figures/README-example-dplyr-2-1.svg

man/figures/README-example-dplyr-1-1.png

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-deprecated.svg

man/figures/functions.svg

metamorphr documentation built on June 10, 2026, 5:07 p.m.