plot.data_list: Plot of feature values in a data list

In metasnf: Meta Clustering with Similarity Network Fusion

Plot of feature values in a data list

Description

This plot, built on ComplexHeatmap::Heatmap(), visualizes the feature values in a data list as a continuous heatmap with observations along the columns and features along the rows.

Usage

## S3 method for class 'data_list'
plot(
  x,
  y = NULL,
  cluster_rows = TRUE,
  cluster_columns = TRUE,
  heatmap_legend_param = NULL,
  row_title = "Observation",
  column_title = "Feature",
  show_row_names = FALSE,
  ...
)

Arguments

x	A data_list object.
y	Optional argument to plot, not used in this method.
cluster_rows	Logical indicating whether to cluster the rows (observations).
cluster_columns	Logical indicating whether to cluster the columns (features).
heatmap_legend_param	A list of parameters for the heatmap legend.
row_title	Title for the rows (observations).
column_title	Title for the columns (features).
show_row_names	Logical indicating whether to show row names.
...	Additional arguments passed to ComplexHeatmap::Heatmap().

Value

A heatmap visualization of feature values.

metasnf documentation built on June 8, 2025, 12:47 p.m.