defineBetaMetrics: Output all beta metrics as a list of named functions

In metricTester: Test Metric and Null Model Statistical Performance

Description

Creates a list of named functions, each of which accept a metrics.input object

Usage

defineBetaMetrics()

Details

All of the beta metrics we calculated for our manuscript are included in this function. To add additional functions, they can either be defined on the fly or, to permanently include a new metric in all downstream simulations, it can be included here. The function needs to be included with a name, and it must accept a metrics.input as input. If the function needs additional elements not included in that input, then the prepData function must also be revised.

Value

A list of named functions

References

Miller, E. T., D. R. Farine, and C. H. Trisos. 2016. Phylogenetic community structure metrics and null models: a review with new methods and software. Ecography DOI: 10.1111/ecog.02070

Examples

defineBetaMetrics()

metricTester documentation built on Dec. 16, 2019, 1:20 a.m.