lag_biomass_incr: lag_biomass_incr

In miLAG: Calculates Microbial Lag Duration (on the Population Level) from Provided Growth Curve Data

lag_biomass_incr

Description

Fits the lag to multiple growth curves based on the biomass increase method

Usage

lag_biomass_incr(data, threshold, n0)

Arguments

data	a data frame with two required columns names: "time" and "biomass",and one optional column: "curve_id" This is data from may come from multiple growth curves
threshold	A value of the biomass increase that we can surely associate with the end of the lag phase rather than random variation during the lag
n0	the initial biomass (lag will be defined as the time point where the difference between biomass and N0 reaches a predefined threshold)

Value

growth curve data (as input) together with additional columns: N0, increase.from.N0, lag

miLAG documentation built on April 3, 2025, 8:09 p.m.