OX40Qpcr: qRT-PCR results

In miRada: MicroRNA Microarray Data Analysis

Description

The qRT-PCR microRNA microarray profiles for 10 samples under four different treatments.

Usage

  data(OX40Qpcr)

Format

A data frame with 27000 rows and 6 columns (variables).

Sample	numeric	sample id.
Treat	numeric	codes of treatments: 0,1,2,3.
Gene	character	MicroRNA names.
dCT	numeric	delta Ct values.
ddCt	numeric	delta delta Ct values.
RQ	numeric	RQ = 2^(-ddCt).

An object qpcr of class qrtpcr.

References

Wang, B., Wang, X-F. and Xi, Y. (2011) "Normalizing bead-based microRNA expression data: a measurement error model-based approach", Bioinformatics, 27(11), 1506-1512.

Wang, B., Howell, P., Bruheim, S. Ju, J, Owen, L.B., Fodstad, O. and Xi, Y. (2011). Systematic Evaluation of Three microRNA Profiling Platforms: Microarray, Beads Array, and Quantitative Real-Time PCR Array, PLoS ONE 6(2): e17167.

Examples

  data(OX40Qpcr)

miRada documentation built on May 2, 2019, 7:59 a.m.