Description Usage Format References Examples
Monozygotic and dizygotic twins trouble concentrating data
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A data frame with 16 observations on the following 6 variables.
IDa numeric vector indicating the unique twin pair ID
TConcenan indicator variable representing trouble concentrating (0 = absent, 1 = present)
inta numeric vector of ones; used in the stand-alone MIXOR program to represent the intercept
Mzan indicator variable representing MZ twins (1 = MZ, 0 = DZ)
Dzan indicator variable representing DZ twins (1 = DZ, 0 = MZ)
freqa numeric vector representing the frequency of the pattern
Ramakrishnan V. et al (1992) Elementary methods for the analysis of dichotomous outcomes in unselected samples of twins Genetic Epidemiology 9, 273-287.
1 2 3 4 5 6 7 8 9 10 11 12 13 | library("mixor")
data("concen")
# sort the data by twin pair ID
concen<-concen[order(concen$ID),]
# common ICC probit model
Common.ICC<-mixor(TConcen~Mz, data=concen, id=ID, weights=freq,
link="probit", nAGQ=10, random.effect.mean=FALSE)
summary(Common.ICC)
# Varying ICC probit model
Varying.ICC<-mixor(TConcen~Mz+Dz, data=concen, id=ID, weights=freq,
which.random.slope=1:2, exclude.fixed.effect=2, link="probit",
nAGQ=20, random.effect.mean=FALSE, UNID=1)
summary(Varying.ICC)
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