mlegp: Maximum Likelihood Estimates of Gaussian Processes
Version 3.1.4

Maximum likelihood Gaussian process modeling for univariate and multi-dimensional outputs with diagnostic plots. Contact the maintainer for a package version that implements sensitivity analysis functionality.

AuthorGarrett M. Dancik
Date of publication2013-12-10 11:10:47
MaintainerGarrett M. Dancik <dancikg@easternct.edu>
LicenseGPL (>= 2)
Version3.1.4
URL
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("mlegp")

Getting started

Package overview

Popular man pages

createGP: creates a Gaussian process object
CV: Gaussian process cross-validation
mlegp: mlegp: maximum likelihood estimation of Gaussian process...
mlegp-svd-functions: Singular Value Decomposition functions for mlegp
plot.gp: Diagnostic Plots for Gaussian processes
plotObservedEffects: Plot Observed Values Vs. Each Dimension of the Design Matrix
predict.gp: Gaussian Process Predictions
See all...

All man pages Function index File listing

Man pages

createGP: creates a Gaussian process object
createWindow: Gaussian Process Plotting Functions
CV: Gaussian process cross-validation
gp.list: Gaussian Process Lists
is.gp: Gaussian Process and Gaussian Process Lists
mlegp: mlegp: maximum likelihood estimation of Gaussian process...
mlegp-internal: Internal Functions for Gaussian Processes
mlegp-naming-functions: mlegp naming functions
mlegp-package: mlegp package
mlegp-svd-functions: Singular Value Decomposition functions for mlegp
nugget: Gaussian Process Nugget Related Functions
paramLookup: Parameter Lookup Functions
plot.gp: Diagnostic Plots for Gaussian processes
plot.gp.list: Diagnostics Plots for Gaussian Process Lists
plotObservedEffects: Plot Observed Values Vs. Each Dimension of the Design Matrix
predict.gp: Gaussian Process Predictions
print.gp: Gaussian Process Summary Information
print.gp.list: Gaussian Process List Summary Information
summary.gp: Gaussian Process Summary Information
summary.gp.list: Gaussian Process List Summary Information
uniqueSummary: Summary of outputs for each unique input

Functions

CV Man page
anyReps Man page
calcCorOneObs Man page
calcLogLike Man page
calcLogLikeManual Man page
calcPredictionError Man page
calcPredictionErrorCV Man page
calcVarMatrix Man page
createGP Man page
createWindow Man page
estimateNugget Man page
getSingularValues Man page
gp.list Man page
gpDim Man page
gpObs Man page
is.gp Man page
is.gp.list Man page
matchIndexes Man page
mlegp Man page
mlegp-internal Man page
mlegp-naming-functions Man page
mlegp-package Man page
mlegp-svd-functions Man page
mlegp2 Man page Source code Source code
nugget Man page
numSingularValues Man page
paramLookup Man page
pcweights Man page
plot.gp Man page
plot.gp.list Man page
plotObservedEffects Man page
plotObservedEffects.gp Man page
plotObservedEffectsDefault Man page
predict.gp Man page
predict.gp.list Man page
predictMu Man page
predictNewYCV Man page
predictNewZ Man page
print.gp Man page
print.gp.list Man page
setGPNames Man page
setParams Man page
singularValueImportance Man page
summary.gp Man page
summary.gp.list Man page
toParamIndexes Man page
uniqueSummary Man page Source code
varPerReps Man page

Files

inst
inst/vignettes
inst/vignettes/mlegp.Rnw
inst/doc
inst/doc/mlegp.pdf
src
src/Makevars
src/nelder_mead_min.c
src/arithmetic_ansi.h
src/gp.h
src/print.h
src/lbfgs.c
src/SFMT-params.h
src/SFMT.c
src/lapack_headers.h
src/matrix_vector.h
src/fit_gp.h
src/nelder_mead_min.h
src/SFMT.h
src/print.c
src/Makevars.win
src/mlegp.c
src/SFMT-params607.h
src/lbfgs.h
NAMESPACE
R
R/uniqueSummary.R
R/plot.gp.list.R
R/createGP.R
R/calcLogLikeManual.R
R/print.gp.R
R/gpObs.R
R/setGPNames.R
R/varPerReps.R
R/mlegp.R
R/pcweights.R
R/calcPredictionErrorCV.R
R/is.gp.R
R/singularValueImportance.R
R/plotObservedEffects.gp.R
R/predictNewZ.R
R/calcCorOneObs.R
R/createWindow.R
R/estimateNugget.R
R/anyReps.R
R/numSingularValues.R
R/matchIndexes.R
R/predictNewYCV.R
R/calcVarMatrix.R
R/summary.gp.R
R/summary.gp.list.R
R/predict.gp.R
R/predictMu.R
R/toParamIndexes.R
R/getSingularValues.R
R/calcPredictionError.R
R/plot.gp.R
R/mlegp2.R
R/CV.R
R/plotObservedEffectsDefault.R
R/gp.list.R
R/plotObservedEffects.R
R/gpDim.R
R/is.gp.list.R
R/print.gp.list.R
R/setParams.R
MD5
DESCRIPTION
man
man/nugget.Rd
man/mlegp-naming-functions.Rd
man/mlegp-svd-functions.Rd
man/mlegp-package.Rd
man/createWindow.Rd
man/summary.gp.list.Rd
man/plotObservedEffects.Rd
man/CV.Rd
man/plot.gp.list.Rd
man/summary.gp.Rd
man/uniqueSummary.Rd
man/is.gp.Rd
man/paramLookup.Rd
man/plot.gp.Rd
man/mlegp-internal.Rd
man/predict.gp.Rd
man/mlegp.Rd
man/createGP.Rd
man/print.gp.Rd
man/print.gp.list.Rd
man/gp.list.Rd
CHANGES
mlegp documentation built on May 19, 2017, 12:01 p.m.

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