mlegp: Maximum Likelihood Estimates of Gaussian Processes

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Maximum likelihood Gaussian process modeling for univariate and multi-dimensional outputs with diagnostic plots. Contact the maintainer for a package version that implements sensitivity analysis functionality.

Author
Garrett M. Dancik
Date of publication
2013-12-10 11:10:47
Maintainer
Garrett M. Dancik <dancikg@easternct.edu>
License
GPL (>= 2)
Version
3.1.4
URLs

View on CRAN

Man pages

createGP
creates a Gaussian process object
createWindow
Gaussian Process Plotting Functions
CV
Gaussian process cross-validation
gp.list
Gaussian Process Lists
is.gp
Gaussian Process and Gaussian Process Lists
mlegp
mlegp: maximum likelihood estimation of Gaussian process...
mlegp-internal
Internal Functions for Gaussian Processes
mlegp-naming-functions
mlegp naming functions
mlegp-package
mlegp package
mlegp-svd-functions
Singular Value Decomposition functions for mlegp
nugget
Gaussian Process Nugget Related Functions
paramLookup
Parameter Lookup Functions
plot.gp
Diagnostic Plots for Gaussian processes
plot.gp.list
Diagnostics Plots for Gaussian Process Lists
plotObservedEffects
Plot Observed Values Vs. Each Dimension of the Design Matrix
predict.gp
Gaussian Process Predictions
print.gp
Gaussian Process Summary Information
print.gp.list
Gaussian Process List Summary Information
summary.gp
Gaussian Process Summary Information
summary.gp.list
Gaussian Process List Summary Information
uniqueSummary
Summary of outputs for each unique input

Files in this package

mlegp
mlegp/inst
mlegp/inst/vignettes
mlegp/inst/vignettes/mlegp.Rnw
mlegp/inst/doc
mlegp/inst/doc/mlegp.pdf
mlegp/src
mlegp/src/Makevars
mlegp/src/nelder_mead_min.c
mlegp/src/arithmetic_ansi.h
mlegp/src/gp.h
mlegp/src/print.h
mlegp/src/lbfgs.c
mlegp/src/SFMT-params.h
mlegp/src/SFMT.c
mlegp/src/lapack_headers.h
mlegp/src/matrix_vector.h
mlegp/src/fit_gp.h
mlegp/src/nelder_mead_min.h
mlegp/src/SFMT.h
mlegp/src/print.c
mlegp/src/Makevars.win
mlegp/src/mlegp.c
mlegp/src/SFMT-params607.h
mlegp/src/lbfgs.h
mlegp/NAMESPACE
mlegp/R
mlegp/R/uniqueSummary.R
mlegp/R/plot.gp.list.R
mlegp/R/createGP.R
mlegp/R/calcLogLikeManual.R
mlegp/R/print.gp.R
mlegp/R/gpObs.R
mlegp/R/setGPNames.R
mlegp/R/varPerReps.R
mlegp/R/mlegp.R
mlegp/R/pcweights.R
mlegp/R/calcPredictionErrorCV.R
mlegp/R/is.gp.R
mlegp/R/singularValueImportance.R
mlegp/R/plotObservedEffects.gp.R
mlegp/R/predictNewZ.R
mlegp/R/calcCorOneObs.R
mlegp/R/createWindow.R
mlegp/R/estimateNugget.R
mlegp/R/anyReps.R
mlegp/R/numSingularValues.R
mlegp/R/matchIndexes.R
mlegp/R/predictNewYCV.R
mlegp/R/calcVarMatrix.R
mlegp/R/summary.gp.R
mlegp/R/summary.gp.list.R
mlegp/R/predict.gp.R
mlegp/R/predictMu.R
mlegp/R/toParamIndexes.R
mlegp/R/getSingularValues.R
mlegp/R/calcPredictionError.R
mlegp/R/plot.gp.R
mlegp/R/mlegp2.R
mlegp/R/CV.R
mlegp/R/plotObservedEffectsDefault.R
mlegp/R/gp.list.R
mlegp/R/plotObservedEffects.R
mlegp/R/gpDim.R
mlegp/R/is.gp.list.R
mlegp/R/print.gp.list.R
mlegp/R/setParams.R
mlegp/MD5
mlegp/DESCRIPTION
mlegp/man
mlegp/man/nugget.Rd
mlegp/man/mlegp-naming-functions.Rd
mlegp/man/mlegp-svd-functions.Rd
mlegp/man/mlegp-package.Rd
mlegp/man/createWindow.Rd
mlegp/man/summary.gp.list.Rd
mlegp/man/plotObservedEffects.Rd
mlegp/man/CV.Rd
mlegp/man/plot.gp.list.Rd
mlegp/man/summary.gp.Rd
mlegp/man/uniqueSummary.Rd
mlegp/man/is.gp.Rd
mlegp/man/paramLookup.Rd
mlegp/man/plot.gp.Rd
mlegp/man/mlegp-internal.Rd
mlegp/man/predict.gp.Rd
mlegp/man/mlegp.Rd
mlegp/man/createGP.Rd
mlegp/man/print.gp.Rd
mlegp/man/print.gp.list.Rd
mlegp/man/gp.list.Rd
mlegp/CHANGES