Man pages for mlmm.gwas
Pipeline for GWAS Using MLMM
| eBIC_allmodels | Compute eBIC and BIC criteria |
| Estimation_allmodels | Compute estimated effects |
| fromeBICtoEstimation | Helper function that create the selec_XXclass argument of the... |
| frommlmm_toebic | Helper that create the selec_XX argument of eBIC_allmodels() |
| genotypes.boxplot | Boxplots representation of the distributions of phenotypes... |
| manhattan.plot | Manhattan plot |
| mlmm_allmodels | Multi-Locus Mixed-Model |
| mlmm.gwas | mlmm.gwas |
| mlmm.gwas.AD | Dataset for examples with the mlmm.gwas package, additive and... |
| mlmm.gwas.FMI | Dataset for examples with the mlmm.gwas package, male+female... |
| run_entire_gwas_pipeline | MLMM, model selection and effects estimation |
| threshold_allmodels | Select significant marker thanks to a p-value threshold |
