mlxR: Simulation of Longitudinal Data

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Simulation and visualization of complex models for longitudinal data. The models are encoded using the model coding language 'Mlxtran', automatically converted into C++ codes, compiled on the fly and linked to R using the 'Rcpp' package. That allows one to implement very easily complex ODE-based models and complex statistical models, including mixed effects models, for continuous, count, categorical, and time-to-event data.

Author
Marc Lavielle [aut, cre], Raphael Kuate [ctb]
Date of publication
2016-09-16 18:15:50
Maintainer
Marc Lavielle <Marc.Lavielle@inria.fr>
License
BSD_2_clause + file LICENSE
Version
3.1.0
URLs

View on CRAN

Man pages

catplotmlx
Plot Categorical Longitudinal Data
exposure
Computation of AUC, Cmax and Cmin
ggplotmlx
mlxR wrapper for ggplot
inlineDataFrame
inline data frame
inlineModel
inline model
kmplotmlx
Kaplan Meier plot
mlxplore
Explore and visualize models
mlxtoolboxReadData
Reads a data file in a monolix Project format for the...
monolix2simulx
Convert a Monolix Project into an executable for the...
pharmml2mlxtran
Translate PharmML into Mlxtran
pkmodel
Easy simulation of PK models Easy simulation of basic PK...
prctilemlx
Percentiles of the empiricial distribution of longitudinal...
readDatamlx
Read formatted data file
read.vector
Reads a table into a vector
setMlxLibraryPath
Sets the MlxLibrary path in order to tell mlxR where is the...
shinymlx
Automatic code generation for Shiny applications
simpopmlx
Population parameters simulation
simulx
Simulation of mixed effects models and longitudinal data
statmlx
Summary of data
writeDatamlx
Write formatted data file

Files in this package

mlxR
mlxR/NAMESPACE
mlxR/R
mlxR/R/inlineModel.R
mlxR/R/simpopmlx.R
mlxR/R/catplotmlx.R
mlxR/R/simulx.R
mlxR/R/convertmlx.R
mlxR/R/exposure.R
mlxR/R/mlxplore.R
mlxR/R/pkmodel.R
mlxR/R/hgdata.R
mlxR/R/processing_setting.R
mlxR/R/initMlxLibrary.R
mlxR/R/mlxtoolboxReadData.R
mlxR/R/pharmml2mlxtran.R
mlxR/R/simulR.R
mlxR/R/processing_monolix.R
mlxR/R/processing_target.R
mlxR/R/monolix2simulx.R
mlxR/R/mlxDataReaderRLibraryBuilder.R
mlxR/R/read.vector.R
mlxR/R/mlxComputeRLibraryBuilder.R
mlxR/R/generateModelFromPkModel.R
mlxR/R/isfield.R
mlxR/R/readdatamlx.R
mlxR/R/patch303.R
mlxR/R/statmlx.R
mlxR/R/writeDatamlx.R
mlxR/R/inlineDataFrame.R
mlxR/R/prctilemlx.R
mlxR/R/toolsmlx.R
mlxR/R/hformat.R
mlxR/R/uuid.R
mlxR/R/addFieldsFromHeader.R
mlxR/R/mlxComputeRCleaner.R
mlxR/R/shinymlx.R
mlxR/R/stoolsmlx.R
mlxR/R/kmplotmlx.R
mlxR/R/ggplotmlx.R
mlxR/README.md
mlxR/MD5
mlxR/DESCRIPTION
mlxR/man
mlxR/man/simpopmlx.Rd
mlxR/man/monolix2simulx.Rd
mlxR/man/catplotmlx.Rd
mlxR/man/inlineDataFrame.Rd
mlxR/man/shinymlx.Rd
mlxR/man/setMlxLibraryPath.Rd
mlxR/man/mlxtoolboxReadData.Rd
mlxR/man/exposure.Rd
mlxR/man/prctilemlx.Rd
mlxR/man/ggplotmlx.Rd
mlxR/man/simulx.Rd
mlxR/man/read.vector.Rd
mlxR/man/kmplotmlx.Rd
mlxR/man/statmlx.Rd
mlxR/man/mlxplore.Rd
mlxR/man/pharmml2mlxtran.Rd
mlxR/man/inlineModel.Rd
mlxR/man/writeDatamlx.Rd
mlxR/man/readDatamlx.Rd
mlxR/man/pkmodel.Rd
mlxR/LICENSE