network_gen: Multiplex Network Generation

In mnda: Multiplex Network Differential Analysis (MNDA)

Multiplex Network Generation

Description

Multiplex Network Generation

Usage

network_gen(N_nodes = 100, N_var_nodes = 5, N_var_nei = 90, noise_sd = 0.1)

Arguments

N_nodes	number of nodes in the graph
N_var_nodes	number of nodes whose neighborhood should change from layer 1 to 2
N_var_nei	number of neighbors that should be changing from layer 1 to 2
noise_sd	the standard deviation of the noise added to the edge weights

Details

In this script we generate random pairs of gene co-expression networks, which are different only in a few (pre-set) number of nodes.

Value

No return value, called to plot subgraphs

Examples

myNet = network_gen(N_nodes = 100)
graphData = myNet[["data_graph"]]
varNodes = myNet[["var_node_set"]]

mnda documentation built on Feb. 16, 2023, 5:32 p.m.