Geometric Morphometric Analysis of Monogenean Anchors

anglecheck | Angle swept by a ray |

anglePolygon | Internal angles of a polygon |

boxplotSort | Median-ordered box plot |

colorBar | Add a color bar |

estimated_ancestral_va | Estimated Generalized Procrustes Analysis (GPA) coordinates... |

heatmapAnnot | Annotated heat map |

hsplot | Scatter plot with marginal histograms |

liewi_gpa | Array data of Generalized Procrustes Analysis (GPA)... |

ligophorus_shape | Shape variable data for 13 _Ligophorus_ species |

ligophorus_tpsdata | Raw landmark coordinate data for 13 _Ligophorus_ species |

ligotree | Maximum likelihood tree for 13 _Ligophorus_ species |

matrix2list | Partitioning a matrix by row into objects of a list |

matrix2list.2 | Partitioning a matrix by row labels into objects of a list |

pca2d | Principal component analyis |

pcloadhm | Heat map representation of principal component loadings of... |

plotCircular | Circular plot |

plotLM | Scatter plot of Generalized Procrustes Analysis (GPA)... |

polyVis | Wireframe plot of monogenean anchor |

procrustesFit | Generalized Procrustes Analysis |

procrustesFit.2 | Mass Extraction of Generalized Procrustes Analysis... |

pwdist | Pairwise Euclidean distances between landmarks |

pwed_pd | Physical distance between landmarks in ventral and dorsal... |

Qscore | Data quality control |

shapeEvo | Statistical test of deviation from directional uniformity and... |

spcolmap | Species-color map |

stdLM | Standardization of landmark configuration by a reference... |

tpColorPlot2d | Color-annotated scatter plot with transparency control |

tpColorPlot3d | Color-annotated three-dimensional scatter plot with... |

tpsRead | Reading tps files into R |

va_mean | Mean Generalized Procrustes Analysis (GPA) coordinates for... |

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