ModelData: Create a list giving data to use in Bayesian inference.

In morseTKTD: Bayesian Inference of TKTD Models

Create a list giving data to use in Bayesian inference.

Description

Function to build the data list to give to stan

1. Order the data set in replicate and then in time to create a new column i_row used to delimited replicates.

2. Create a matrix of replicate and index "id_row"

3. Compute Nprec = lag of Nsurv

4. return a list of element to be passed to Stan sampler

Create a list of scalars giving priors to use in Bayesian inference.

Usage

modelData(data, model_type, ...)

## S3 method for class 'SurvData'
modelData(data, model_type = c("SD", "IT"), hb_value = NULL, ...)

build_stanData(x)

build_priors(x, model_type = c("SD", "IT"), hb_value = NULL)

Arguments

data	An object of class SurvData
model_type	TKTD model type ('SD' or 'IT')
...	Further arguments to be passed to generic methods
hb_value	default is NULL, can be fixed by specifying a numeric.
x	An object of class survData

Value

A list for parameterization of priors for Bayesian inference.

A list for parameterization of priors for Bayesian inference with JAGS.

morseTKTD documentation built on June 8, 2025, 10:28 a.m.