Files in mpactr
Correction of Preprocessed MS Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
TODO
R/RcppExports.R
R/qc_graph_pactr-class.R
R/filter_pactr-methods.R
R/import_data.R
R/mpactr-methods.R
R/mpactr-accessors.R
R/mpactR-package.R
R/filters.R
R/data.R
R/peak_table_formatter.R
R/mpactr-class.R
R/quality_control.R
R/filter_pactr-class.R
R/pactr-class_cloning.R
R/filter_pactr-accessors.R
R/statistics.R
R/summary-class.R
src/RcppExports.cpp
src/main.cpp
inst/CITATION
inst/doc/mpactr.R
inst/doc/mpactr.Rmd
inst/doc/downstream_analyses.R
inst/doc/reference_semantics.R
inst/doc/reference_semantics.Rmd
inst/doc/downstream_analyses.Rmd
inst/doc/downstream_analyses.html
inst/doc/reference_semantics.html
inst/doc/mpactr.html
inst/extdata/PTY087I2_samplelist.csv
inst/extdata/metadata.csv
inst/extdata/PTY087I2_dataset.csv
inst/extdata/cultures_metaboscape_metadata.csv
inst/extdata/coculture_peak_table.csv
inst/extdata/cultures_peak_table.csv
inst/extdata/cultures_metadata.csv
inst/extdata/cultures_metaboscape_peaktable.csv
inst/extdata/PTY087I2_extractmetadata.csv
inst/extdata/ion_masses/DefinedIons.csv
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-mpactr-methods.R
tests/testthat/test-quality_control.R
tests/testthat/test-filter_pactr-methods.R
tests/testthat/test-qc_graph_pactr-class.R
tests/testthat/test-peak_table_formatter.R
tests/testthat/test-statistics.R
tests/testthat/test-filters.R
tests/testthat/test-data.R
tests/testthat/test-summary-class.R
tests/testthat/test-filter_pactr-class.R
tests/testthat/test-filter_pactr-accessors.R
tests/testthat/test-import_data.R
tests/testthat/test-pactr-class_cloning.R
tests/testthat/test-mpactr-class.R
tests/testthat/test-mpactr-accessors.R
tests/testthat/exttestdata/102623_metadata_simple.csv
tests/testthat/exttestdata/102623_metadata_correct.csv
tests/testthat/exttestdata/peak_table_dups.csv
tests/testthat/exttestdata/102623_samplelist.csv
tests/testthat/exttestdata/102623_peaktable_coculture_simple_groupaverages.csv
tests/testthat/exttestdata/MJB_MonoVSCoculture_metaboscape_ft.csv
tests/testthat/exttestdata/expected_treemap.RDS
tests/testthat/exttestdata/msdata_blankfilterg.csv
tests/testthat/exttestdata/msdata_blankfilterg_abundance.csv
tests/testthat/exttestdata/output_Blanks
tests/testthat/exttestdata/102623_peaktable_MonoVsCoculture_expandedgradient.csv
tests/testthat/exttestdata/msdata_errprop_mean_full.csv
tests/testthat/exttestdata/output_Coculture
tests/testthat/exttestdata/102623_peaktable_coculture_simple.csv
tests/testthat/exttestdata/output_JC28_monoculture
tests/testthat/exttestdata/output_ANGDT_monoculture
tests/testthat/exttestdata/102623_peaktable_coculture_simple_merged.csv
tests/testthat/exttestdata/expected_treemap.png
tests/testthat/exttestdata/cut_ions.csv
tests/testthat/exttestdata/output_ANG18_monoculture.csv
tests/testthat/exttestdata/peak_table_post_formatted.csv
tests/testthat/exttestdata/102623_MonoVCoculture_pt.csv
tests/testthat/exttestdata/output_JC1_monoculture
tests/testthat/exttestdata/102623_peaktable_coculture_simple/iondict.csv
vignettes/mpactr.Rmd
vignettes/reference_semantics.Rmd
vignettes/downstream_analyses.Rmd
data/cultures_data.rda
man/get_group_averages.Rd
man/get_cv_data.Rd
man/filter_mispicked_ions.Rd
man/qc_summary.Rd
man/filter_group.Rd
man/filter_cv.Rd
man/plot_qc_tree.Rd
man/example_path.Rd
man/filter_insource_ions.Rd
man/get_similar_ions.Rd
man/cultures_data.Rd
man/import_data.Rd
man/get_meta_data.Rd
man/mpactr-package.Rd
man/filter_summary.Rd
man/get_raw_data.Rd
man/get_peak_table.Rd
man/figures/logo.png
