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#' msSPChelpR
#'
#' R helper functions for Second Primary Cancer analyses
#'
#' @section Main functions:
#'
#' Functions include asir, ir_crosstab, pat_status, reshape, sir_byfutime and summarize_sir_results.
#'
#' @section Package context:
#' This package follows the principles of the "tidyverse".
#'
#'
#' @docType package
#' @name msSPChelpR
#' @keywords internal
NULL
## quiets warnings of R CMD check standard objects that appear in function
if(getRversion() >= "2.15.1") utils::globalVariables(c(".",
".N",
"n",
"data",
"counter",
"standard_population",
"population",
"rates",
"p_datedeath_orig",
"status_var_orig",
"where", #temporary fix because tidyverse::where is not exported,
"fu_time",
"fu_time_sort",
"futimegroup",
"i_expected",
"i_observed",
"i_pyar",
"incidence_cases",
"incidence_crude_rate",
"max_pyar",
"min_pyar",
"n_base",
"population_n_per_year",
"population_pyar",
"pyar",
"age",
"region",
"sex",
"sir",
"sir_lci",
"sir_uci",
"t_site",
"t_site_orig",
"race",
"yvar_name",
"yvar_label",
"xvar_name",
"xvar_label",
"year",
"observed",
"ref_inc_cases",
"ref_inc_crude_rate",
"ref_population_pyar",
"expected",
"group_pyar",
"group_observed",
"group_expected",
"group_ref_inc_cases",
"group_incidence_crude_rate",
"group_ref_population_pyar",
"group_n_base",
"reg_group",
"age_group",
"sex_group",
"year_group",
"race_group",
"site_group"
))
release_questions <- function() {
c(
"Is the version number updated in DESCRIPTION, NEWS, and README?"
)
}
# Workaround for := import from data.table import
# https://github.com/markfairbanks/tidytable/issues/269#issuecomment-852303061
.datatable.aware <- TRUE
# #to avoid problems at rhub check use the following code
# rhub::check(platform="windows-x86_64-devel", env_vars=c(R_COMPILE_AND_INSTALL_PACKAGES = "always"))
# rhub::check_for_cran(env_vars=c(R_COMPILE_AND_INSTALL_PACKAGES = "always"))
# previous_checks <- rhub::list_my_checks(email = "marian.eberl@tum.de")
# previous_checks[[3]][[15]]2
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