read_pathway: Read metabolite set file (*.xml)
In mseapca: Metabolite Set Enrichment Analysis for Loadings
read_pathway R Documentation
Read metabolite set file (*.xml)
Description
This function generates metabolite set list from metabolite set file (XML).
This is mainly used to be called by other functions.
Usage
read_pathway(fullpath)
Arguments
fullpath
file path of metabolite set (XML)
Value
list of metabolite set name and metabolite IDs.
Author(s)
Hiroyuki Yamamoto
Examples
# filename <- "C:/R/pathway.xml" # load metabolite set file
# M <- read_pathway(filename) # Convert XML to metabolite set (list)
mseapca documentation built on Aug. 8, 2025, 7:20 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| read_pathway | R Documentation |
Read metabolite set file (*.xml)
Description
This function generates metabolite set list from metabolite set file (XML). This is mainly used to be called by other functions.
Usage
read_pathway(fullpath)
Arguments
fullpath |
file path of metabolite set (XML) |
Value
list of metabolite set name and metabolite IDs.
Author(s)
Hiroyuki Yamamoto
Examples
# filename <- "C:/R/pathway.xml" # load metabolite set file
# M <- read_pathway(filename) # Convert XML to metabolite set (list)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.