read_pathway: Read metabolite set file (*.xml)
In mseapca: Metabolite set enrichment analysis for factor loading in principal component analysis
Description
Usage
Arguments
Value
Author(s)
Examples
Description
This function generates metabolite set list from metabolite set file (XML).
This is mainly used to be called by other functions.
Usage
1
read_pathway(fullpath)
Arguments
fullpath
file path of metabolite set (XML)
Value
list of metabolite set name and metabolite IDs.
Author(s)
Hiroyuki Yamamoto
Examples
1
2
# filename <- "C:/R/pathway.xml" # load metabolite set file
# M <- read_pathway(filename) # Convert XML to metabolite set (list)
mseapca documentation built on May 1, 2019, 7:31 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
This function generates metabolite set list from metabolite set file (XML). This is mainly used to be called by other functions.
Usage
1 | read_pathway(fullpath)
|
Arguments
fullpath |
file path of metabolite set (XML) |
Value
list of metabolite set name and metabolite IDs.
Author(s)
Hiroyuki Yamamoto
Examples
1 2 | # filename <- "C:/R/pathway.xml" # load metabolite set file
# M <- read_pathway(filename) # Convert XML to metabolite set (list)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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