Man pages for msig
An R Package for Exploring Molecular Signatures Database
| browse_msig | Retrieve Gene set Names from MSigDB database Retrieve gene... |
| browse_show_collection | Show collection of MSigDB database |
| local_msig | Query gene set names from local data |
| local_version | Local database version |
| msig_detail | Retrieve detail information of gene set |
| msig_download | Download MsigDB database |
| msig_filt | Filt data by key words Case insensitive |
| msig_gene | Retrieve gene by Gene set Name |
| msig_geneSymbol | Retrieve gene by Gene Symbol from MsigDB |
| msig_update | Update local MsigDB database |
| msig_version | version information of MSigDB database |
| msig_view | View data in viewer panel |
| NewMsigDB | Create NewMsigDB object for new versions of MsigDB database |
| read_msigdb_xml | read MSigDB xml data |
| related_geneset | Query related gene sets |
| search_msig | Query MSigDB database by cookie |
| search_show_collection | Show collctions for msigdb_search() |
| search_show_contributor | Show contributor for msigdb_search() |
| search_show_organism | Show organism for msigdb_search() |
| show_local_collection | Show collections of local MsigDB database |
| show_local_contributor | Show contributors of local MsigDB database |
| show_local_contributor_org | Show contributor_orgs of local MsigDB database |
| show_local_data | Show local data used in this package |
| show_local_sub_collection | Show sub_collections of local MsigDB database |
| similarity_geneset | Query similarity gene sets |
