msig_gene: Retrieve gene by Gene set Name

In msig: An R Package for Exploring Molecular Signatures Database

Description

Retrieve gene by Gene set Name

Usage

msig_gene(..., list = TRUE, info = TRUE)

## S3 method for class 'character'
msig_gene(..., list = TRUE, info = TRUE)

## S3 method for class 'data.frame'
msig_gene(..., list = TRUE, info = TRUE)

Arguments

...	one or more geneset names, which can be little or capital.
list	logical, default is FALSE, whether to show result by list.
info	logical, whether to show information about gene set.

Value

Print detail information about the geneset, number of genes and return all gene names.

Examples

genes <- msig_gene('izadpanah_stem_cell_adipose_vs_bone_dn',
                   'REACTOME_DEGRADATION_OF_AXIN')
genes |>
    msig_view()

msig documentation built on June 29, 2021, 9:08 a.m.