ABH_pi0_est: Lowest Slope Line (LSL) method of Hochberg and Benjamini for...
In mutoss: Unified Multiple Testing Procedures
ABH_pi0_est R Documentation
Lowest Slope Line (LSL) method of Hochberg and Benjamini for estimating pi0
Description
The Lowest Slope Line (LSL) method of Hochberg and Benjamini for estimating pi0 is applied to pValues.
This method for estimating pi0 is motivated by the graphical approach proposed
by Schweder and Spjotvoll (1982), as developed and presented in Hochberg and Benjamini (1990).
Usage
ABH_pi0_est(pValues)
Arguments
pValues
The raw p-values for the marginal test problems
Value
pi0.ABH
The estimated proportion of true null hypotheses.
Author(s)
WerftWiebke
References
Hochberg, Y. and Benjamini, Y. (1990). More powerful procedures for multiple significance testing.
Statistics in Medicine 9, 811-818.
Schweder, T. and Spjotvoll, E. (1982). Plots of P-values to evaluate many tests simultaneously.
Biometrika 69, 3, 493-502.
Examples
my.pvals <- c(runif(50), runif(50, 0, 0.01))
result <- ABH_pi0_est(my.pvals)
mutoss documentation built on March 31, 2023, 8:46 p.m.
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| ABH_pi0_est | R Documentation |
Lowest Slope Line (LSL) method of Hochberg and Benjamini for estimating pi0
Description
The Lowest Slope Line (LSL) method of Hochberg and Benjamini for estimating pi0 is applied to pValues. This method for estimating pi0 is motivated by the graphical approach proposed by Schweder and Spjotvoll (1982), as developed and presented in Hochberg and Benjamini (1990).
Usage
ABH_pi0_est(pValues)Arguments
pValues |
The raw p-values for the marginal test problems |
Value
pi0.ABH |
The estimated proportion of true null hypotheses. |
Author(s)
WerftWiebke
References
Hochberg, Y. and Benjamini, Y. (1990). More powerful procedures for multiple significance testing. Statistics in Medicine 9, 811-818.
Schweder, T. and Spjotvoll, E. (1982). Plots of P-values to evaluate many tests simultaneously. Biometrika 69, 3, 493-502.
Examples
my.pvals <- c(runif(50), runif(50, 0, 0.01))
result <- ABH_pi0_est(my.pvals)R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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