neat: Efficient Network Enrichment Analysis Test

Includes functions and examples to compute NEAT, a network-based test for gene enrichment analysis (Signorelli, Vinciotti and Wit, 2016, <DOI:10.1186/s12859-016-1203-6>).

Install the latest version of this package by entering the following in R:
install.packages("neat")
AuthorMirko Signorelli, Veronica Vinciotti and Ernst C. Wit
Date of publication2016-09-07 08:49:09
MaintainerMirko Signorelli <m.signorelli@rug.nl>
LicenseGPL-3
Version1.0
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1203-6, http://mirkosignorelli.wixsite.com/home/software

View on CRAN

Files

inst
inst/CITATION
inst/doc
inst/doc/neat.html
inst/doc/neat.Rmd
inst/doc/neat.R
NAMESPACE
data
data/yeast.RData
data/datalist
R
R/neat.R
vignettes
vignettes/neat.Rmd
MD5
build
build/vignette.rds
DESCRIPTION
man
man/plot.neat.Rd man/summary.neat.Rd man/neat-package.Rd man/networkmatrix.Rd man/print.neat.Rd man/neat.Rd man/yeast.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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