netassoc: Inference of Species Associations from Co-Occurrence Data

Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.

Package details

AuthorBenjamin Blonder, Naia Morueta-Holme
MaintainerBenjamin Blonder <benjamin.blonder@berkeley.edu>
LicenseGPL-3
Version0.7.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("netassoc")

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netassoc documentation built on July 20, 2022, 5:06 p.m.