Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.
|Author||Benjamin Blonder, Naia Morueta-Holme|
|Date of publication||2015-11-24 07:46:52|
|Maintainer||Benjamin Blonder <email@example.com>|
make_netassoc_network: Infer species-association network
netassoc-package: Inference of Species Associations from Co-Occurrence Data
pairwise_association: Pairwise associations
partial_correlation: Partial correlation coefficients
plot_netassoc_matrix: Plots matrix with colormap
plot_netassoc_network: Plots species association network
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.