netassoc-package: Inference of Species Associations from Co-Occurrence Data

Description Author(s) References


Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.


Benjamin Blonder, Naia Morueta-Holme

Maintainer: Benjamin Blonder <[email protected]>


Morueta-Holme, N., Blonder, B., et al. A network approach for inferring species associations from co-occurrence data. (in review)

netassoc documentation built on May 2, 2019, 6:49 a.m.