API for ngme2
Linear Latent Non-Gaussian Models with Flexible Distributions
| Global functions | |
|---|---|
| .apply_parameter_transforms | Source code |
| .batch_means_boundaries | Source code |
| .check_stationary_moment_params | Source code |
| .default_stepsize_control | Source code |
| .delta_derivative | Source code |
| .delta_transform_batch_ci | Source code |
| .gig_moments | Source code |
| .ngme_chain_trajectories | Source code |
| .normal_mean_variance_mixture_moments | Source code |
| .onAttach | Source code |
| .stationary_noise_parameter | Source code |
| .validate_prior_target | Source code |
| ARcov | Man page Source code |
| D_l | Source code |
| abort_invalid_metric | Source code |
| adagrad | Man page Source code |
| adam | Man page Source code |
| adamW | Man page Source code |
| adaptive_gd | Man page Source code |
| ar | Man page Source code |
| ar1 | Man page Source code |
| ar1_a2th | Source code |
| ar1_th2a | Source code |
| argo_float | Man page |
| arma | Man page Source code |
| arma11 | Man page Source code |
| as_internal_prior | Source code |
| as_map | Source code |
| batch_decay | Man page Source code |
| batch_means_ci | Man page Source code |
| batch_means_estimator | Man page Source code |
| bfgs | Man page Source code |
| build_D | Source code |
| build_cv_aw_draws_matrix | Source code |
| build_cv_rebuild_env | Source code |
| build_effect_K | Source code |
| build_metric_message | Source code |
| build_ngme_from_chain_output | Source code |
| build_predict_model_matrix | Source code |
| build_prediction_output_samples | Source code |
| bv | Man page Source code |
| bv_matern | Man page Source code |
| calibrate_inv_exp_lambda | Man page Source code |
| calibrate_inv_exp_lambda_driven_nig | Man page Source code |
| check_dim | Source code |
| cienaga | Man page |
| cienaga.border | Man page |
| coerce_sub_model | Source code |
| collect_cv_chain_samples | Source code |
| compare_noise_kld | Man page Source code |
| compare_traceplot | Source code |
| compile_beta_priors | Source code |
| compile_noise_priors | Source code |
| compile_operator_priors | Source code |
| compute_coef_new | Source code |
| compute_corr_index | Source code |
| compute_err_1rep | Source code |
| compute_err_merged_reps | Source code |
| compute_err_reps | Source code |
| compute_index_corr_from_map | Man page Source code |
| compute_log_like | Man page Source code |
| compute_log_like_cpp | Source code |
| compute_metric_samples | Source code |
| compute_ngme_CI | Man page |
| compute_ngme_ci | Man page Source code |
| compute_ngme_sgld_samples | Man page Source code |
| compute_pred_N | Source code |
| compute_score_given_pred | Man page Source code |
| compute_scores | Source code |
| contain_bv_model | Source code |
| control_ngme | Man page Source code |
| control_opt | Man page Source code |
| control_opt_batch_ci | Man page Source code |
| convert_noise_list_to_normal_nig | Source code |
| create_paired_cv_splits | Man page Source code |
| cross_validation | Man page Source code |
| default_beta_prior | Source code |
| default_beta_prior_for_param | Source code |
| default_beta_priors | Source code |
| default_noise_priors | Source code |
| default_operator_prior | Source code |
| dependence_matrix | Source code |
| dgal | Man page Source code |
| dgig | Man page Source code |
| dig | Man page Source code |
| digam | Man page Source code |
| dim_map | Source code |
| disambiguate_trace_param_names | Source code |
| dnig | Man page Source code |
| emprical_mode | Source code |
| ensure_prediction_sample_matrix | Source code |
| estimate_cpp | Source code |
| expand_prediction_A_for_composite_noise | Source code |
| extract_parameters | Source code |
| f | Man page Source code |
| gal | Man page Source code |
| generic | Man page Source code |
| generic_ns | Man page Source code |
| get_data_from_formula | Man page Source code |
| get_feff_plot_names | Source code |
| get_inla_mesh_dimension | Source code |
| get_latent_info | Source code |
| get_ngme_chain_fits | Source code |
| get_noise_info | Source code |
| get_noise_param | Man page Source code |
| get_openmp_threads | Source code |
| get_param_trans | Source code |
| get_parameter_distance | Man page Source code |
| get_trace_trajectories | Man page Source code |
| get_trajectories | Man page Source code |
| get_trajs | Source code |
| gig | Man page |
| has_pardiso | Source code |
| idx_range | Source code |
| ig | Man page |
| igam | Man page |
| iid | Man page Source code |
| infer_cv_partition_column | Source code |
| is_prior_collection | Source code |
| is_prior_spec | Source code |
| is_stationary | Source code |
| length_map | Source code |
| make_time_series_cv_index | Man page Source code |
| matern | Man page Source code |
| mean_list | Man page Source code |
| merge_noise | Man page Source code |
| merge_replicates | Man page Source code |
| momentum | Man page Source code |
| name2fun | Man page Source code |
| ngme | Man page Source code |
| ngme2 | Man page |
| ngme2-package | Man page |
| ngme_as_sparse | Man page Source code |
| ngme_batch_ci | Man page Source code |
| ngme_beta_center_to_raw | Source code |
| ngme_beta_raw_to_center | Source code |
| ngme_build_A | Source code |
| ngme_build_mesh | Source code |
| ngme_center_non_intercept_cols | Source code |
| ngme_check_isotropic_normal_beta_prior | Source code |
| ngme_collect_intercept_shifts | Source code |
| ngme_cov_matrix | Man page Source code |
| ngme_diag_vec | Source code |
| ngme_format | Source code |
| ngme_guess_intercept_targets | Source code |
| ngme_make_mesh_repls | Man page Source code |
| ngme_map_isotropic_normal_priors_to_svd | Source code |
| ngme_model | Source code |
| ngme_model_types | Man page Source code |
| ngme_noise | Man page Source code |
| ngme_noise_types | Man page Source code |
| ngme_operator | Source code |
| ngme_optimizers | Man page Source code |
| ngme_parse_formula | Man page Source code |
| ngme_post_samples | Man page Source code |
| ngme_prior_types | Man page Source code |
| ngme_replicate | Source code |
| ngme_restore_fixed_effect_scale | Source code |
| ngme_result | Man page Source code |
| ngme_sgld_ci | Man page Source code |
| ngme_sgld_samples | Man page Source code |
| ngme_shift_intercepts | Source code |
| ngme_ts_make_A | Man page Source code |
| ngme_update | Man page |
| nig | Man page Source code |
| noise_gal | Man page |
| noise_gal_moments | Man page Source code |
| noise_moments | Man page Source code |
| noise_moments.ngme_noise | Man page Source code |
| noise_nig | Man page |
| noise_nig_moments | Man page Source code |
| noise_normal | Man page |
| noise_normal_nig | Man page |
| noise_skew_t | Man page |
| noise_t | Man page |
| normal | Source code |
| normal_nig | Source code |
| normalize_prediction_seed | Source code |
| openmp_test | Man page |
| ou | Man page Source code |
| parse_metric_output | Source code |
| pgal | Man page Source code |
| pgig | Man page Source code |
| pig | Man page Source code |
| pigam | Man page Source code |
| plot.ngme_noise | Man page Source code |
| plot.ngme_sgld_ci | Man page Source code |
| plot.parameter_distance | Man page Source code |
| pm25_quarterly_2022 | Man page |
| pnig | Man page Source code |
| poly_decay | Man page Source code |
| posterior_plot | Man page Source code |
| precision_matrix_multivariate | Man page Source code |
| precision_matrix_multivariate_spde | Man page Source code |
| precond_sgd | Man page Source code |
| predict.ngme | Man page Source code |
| predict_ngme_param_mean | Source code |
| prediction_map_size | Source code |
| prediction_needs_output_samples_for_composite_noise | Source code |
| prediction_requested_model_names | Source code |
| prediction_type_names | Source code |
| prepare_metric_data | Source code |
| print.ngme | Man page Source code |
| print.ngme_model | Man page Source code |
| print.ngme_noise | Man page Source code |
| print.ngme_operator | Man page Source code |
| print.ngme_replicate | Man page Source code |
| print.ngme_trajectories | Man page Source code |
| print.noise_kld_comparison | Man page Source code |
| print.parameter_distance | Man page Source code |
| print.summary.ngme_batch_ci | Source code |
| prior_half_cauchy | Man page Source code |
| prior_inv_exp | Man page Source code |
| prior_inv_exponential | Man page Source code |
| prior_none | Man page Source code |
| prior_normal | Man page Source code |
| prior_pc_sd | Man page Source code |
| priors | Man page Source code |
| qgal | Man page Source code |
| qgig | Man page Source code |
| qig | Man page Source code |
| qigam | Man page Source code |
| qnig | Man page Source code |
| rGIG_cpp | Source code |
| re | Man page Source code |
| rebuild_cv_model_with_data | Source code |
| recycle_predictive_noise_param | Source code |
| rep_map | Source code |
| resolve_cv_partition_for_new_data | Source code |
| resolve_cv_symbol_binding | Source code |
| resolve_ngme_chain_fits | Source code |
| rgal | Man page |
| rgig | Man page |
| rig | Man page |
| rigam | Man page |
| rmsprop | Man page Source code |
| rnig | Man page |
| rw1 | Man page Source code |
| rw2 | Man page Source code |
| sampling_cpp | Source code |
| sgd | Man page Source code |
| sgld | Man page Source code |
| simulate.ngme | Man page Source code |
| simulate.ngme_model | Man page Source code |
| simulate.ngme_noise | Man page Source code |
| simulate_1rep | Source code |
| simulate_noise | Source code |
| simulate_predictive_noise_draws | Source code |
| skew_t_noise | Source code |
| spacetime | Man page Source code |
| split_matrix | Source code |
| stepsize_control | Man page Source code |
| stepsize_decay | Man page Source code |
| stepsize_schedule | Man page Source code |
| strip_ngme_chain_attributes | Source code |
| sub_map | Source code |
| subset_noise | Source code |
| summarize_prediction_samples | Source code |
| summary.ngme | Man page Source code |
| summary.ngme_batch_ci | Man page Source code |
| t_noise | Source code |
| test_ngme | Man page Source code |
| tp | Man page Source code |
| traceplot | Man page Source code |
| transform_traj | Source code |
| transplant_cv_hyperparameters | Source code |
| transplant_noise_hyperparameters | Source code |
| update_control_ngme | Source code |
| update_ngme_est | Source code |
| update_noise | Source code |
| validate_prediction_map | Source code |
| validate_rep_or_group | Source code |
| var1 | Man page Source code |
| vecK_to_Sigma | Source code |
| vech | Source code |
| vech_to_mat | Source code |
| veci | Source code |
