Files in ngme2

Linear Latent Non-Gaussian Models with Flexible Distributions

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/models.R R/batch-means.R R/complex-models.R R/gal.R R/noise.R R/control.R R/predict.ngme.R R/prior.R R/generic_ns.R R/prior_calibration.R R/simulation.R R/generic.R R/ngme2-package.R R/predict.R R/chain-utils.R R/loglik.R R/f.R R/util.R R/plot.ngme.R R/randeff.R R/test.ngme.R R/ngme.constant.R R/optimizer.R R/operator.R R/info_datasets.R R/distributions.R R/ngme_replicate.R R/ngme.R R/validation.R

src/Makevars

src/sample_rGIG.h

src/estimate.cpp

src/RcppExports.cpp

src/sample_rGIG.cpp

src/operator.h

src/latent.cpp

src/block.h

src/model.h

src/block.cpp

src/optimizer.h

src/ngme.h

src/loglikelihood.cpp

src/noise.cpp

src/optimizer.cpp

src/operator.cpp

src/prior.h

src/noise.h

src/ngme.cpp

src/prior.cpp

src/latent.h

src/include/MatrixAlgebra.h

src/include/EigenKronecker.h

src/include/solver.h

src/include/timer.h

src/include/GIG.h

src/include/transform_utils.h

src/include/rgig.h

src/util/MatrixAlgebra.cpp

src/util/rgig.cpp

src/util/solver.cpp

src/util/GIG.cpp

src/latents/generic_ns.cpp

src/latents/rcallback.cpp

src/latents/generic.cpp

src/latents/tensorprod.cpp

src/latents/arma.cpp

src/latents/ou.cpp

src/latents/matern.cpp

src/latents/randeff.cpp

src/latents/bivar.cpp

src/latents/fractional/fractional_operators.cpp

src/latents/fractional/roots_tables.hpp

src/latents/fractional/fractional_operators.hpp

src/test/test-block.cpp

src/test/test-opt.cpp

src/test/test-algebra.cpp

src/test/test-model.cpp

src/SuiteSparse/CHOLMOD/Makefile

src/SuiteSparse/CHOLMOD/Partition/cholmod_csymamd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_ccolamd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_l_camd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_metis_wrapper.h

src/SuiteSparse/CHOLMOD/Partition/cholmod_metis_wrapper.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_l_csymamd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_nesdis.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_l_ccolamd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_l_metis.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_l_nesdis.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_camd.c

src/SuiteSparse/CHOLMOD/Partition/cholmod_metis.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_l_rowadd.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_rowdel.c

src/SuiteSparse/CHOLMOD/Modify/t_cholmod_rowdel_worker.c

src/SuiteSparse/CHOLMOD/Modify/t_cholmod_rowadd_worker.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_l_updown.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_l_rowdel.c

src/SuiteSparse/CHOLMOD/Modify/t_cholmod_updown_numkr.c

src/SuiteSparse/CHOLMOD/Modify/t_cholmod_updown_wdim.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_rowadd.c

src/SuiteSparse/CHOLMOD/Modify/cholmod_updown.c

src/SuiteSparse/CHOLMOD/Modify/t_cholmod_updown_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_triplet_to_sparse_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_band.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_pack_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_dbound.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_malloc.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_ensure_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_realloc_multiple.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_version.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_memdebug.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_clear_flag.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_aat.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_ensure_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_allocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_eye.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_transpose.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_bound.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_calloc.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_add.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_dense2_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ones_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_score_comp.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_triplet_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy_dense2.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_dense_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_reallocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_spzeros.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_unpermuted.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_start.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_xtype.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_realloc.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_pack_factor_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_version.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_realloc_multiple.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_triplet_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_factor_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_ptranspose.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_alloc_work.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_calloc.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_alloc_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_cumsum.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free_dense.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ensure_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_speye.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_allocate_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy_dense2.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_sparse_to_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_defaults.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_score_comp.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_ones.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_zeros.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_error.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_xdtype_template.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_defaults.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_finish.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_column.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_sbound.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_change_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_reallocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_malloc.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_set_empty.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_realloc.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_add.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_set_empty.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_clear_flag.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_reallocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_reallocate_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_reallocate_column.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_cumsum.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_error.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_reallocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_start.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_alloc_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_triplet_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_allocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_xdtype.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_sparse.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_speye.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_mult_uint64_t.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_malloc.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_hypot.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_3_template.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_to_sparse_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_ones.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_sparse_to_dense.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_add_size_t.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free_triplet.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_band_nnz.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_3_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free_triplet.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_allocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_mult_size_t.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_triplet_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_add.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_band.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_template.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_add_size_t.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ones.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_set_empty.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_add_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_alloc_work.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_band_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_reallocate_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_allocate_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_eye.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_version.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_aat_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sort_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_band_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_allocate_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_speye.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_ptranspose.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_allocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_speye_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_sbound.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_band.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_dbound.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_transpose_unsym.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_sparse_to_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_ptranspose.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_start.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym_worker.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_template.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_reallocate_column.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_defaults.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_sparse_to_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_pack_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_alloc_work.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_pack_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sort.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_realloc.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_finish.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free_work.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_zeros.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_allocate_work.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_allocate_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_transpose_unsym.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_2_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_allocate_work.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_finish.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_dense_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy_dense.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_eye_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_eye.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_sort.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_band_nnz.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_spzeros.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_maxrank.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_cumsum.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_allocate_dense.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_aat.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_dense_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_nnz.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_factor_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_xtype.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_realloc_multiple.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_divcomplex.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_transpose_sym.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free_factor.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_add_size_t.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_template.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_clear_flag.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_factor_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_maxrank.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_zeros.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_change_factor_1_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_mult_size_t.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_mult_size_t.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_score_comp.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_sparse_to_dense_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_transpose_sym.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free_triplet.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_allocate_triplet.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_copy_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_hypot.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_nnz.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_allocate_dense.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_transpose.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_dense2.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_unsym.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_maxrank.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_alloc_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_free.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_copy_sparse_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_divcomplex.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_dense_to_sparse.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_transpose_sym_permuted.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_dense_nnz_worker.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_spzeros.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_error.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_sort.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_free_work.c

src/SuiteSparse/CHOLMOD/Utility/t_cholmod_reallocate_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_copy_sparse.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_l_change_factor.c

src/SuiteSparse/CHOLMOD/Utility/cholmod_free_work.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/include/metis.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/include/original/metis.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/meshpart.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/initpart.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/util.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/gklib_rename.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/fm.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/checkgraph.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayrefine.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/wspace.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/stat.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/compress.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/mcutil.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/frename.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/macros.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/separator.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/srefine.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/coarsen.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/pmetis.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/auxapi.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/mmd.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/fortran.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/minconn.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/options.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/debug.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/defs.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/gklib.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/proto.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/bucketsort.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/graph.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/balance.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/ometis.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/refine.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/sfm.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/mincover.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kwayfm.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/struct.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/gklib_defs.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/parmetis.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/contig.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/mesh.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/metislib.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/stdheaders.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/rename.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/timing.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/libmetis/kmetis.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_types.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/util.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/fs.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_arch.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/mcore.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkutils.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_proto.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/csr.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/seq.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/sort.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkblas.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/evaluate.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_defs.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/pdb.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkrandom.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/itemsets.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/fkvkselect.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_getopt.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/ms_inttypes.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_externs.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/htable.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/timers.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mksort.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue2.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/random.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkmemory.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/omp.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/graph.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/getopt.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/blas.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/io.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_mkpqueue.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_macros.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/ms_stdint.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/b64.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/rw.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/string.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/error.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gk_struct.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/tokenizer.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/ms_stat.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/memory.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/GKlib.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/pqueue.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/gkregex.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/conf/check_thread_storage.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/test/strings.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/test/fis.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/test/gksort.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/test/rw.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/test/gkgraph.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/gk_arch.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/gk_proto.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/gk_mkrandom.h

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/error.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/memory.c

src/SuiteSparse/CHOLMOD/SuiteSparse_metis/GKlib/original/GKlib.h

src/SuiteSparse/CHOLMOD/Check/cholmod_write.c

src/SuiteSparse/CHOLMOD/Check/cholmod_l_read.c

src/SuiteSparse/CHOLMOD/Check/cholmod_read.c

src/SuiteSparse/CHOLMOD/Check/cholmod_check.c

src/SuiteSparse/CHOLMOD/Check/cholmod_l_write.c

src/SuiteSparse/CHOLMOD/Check/cholmod_l_check.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_etree.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_rowfac_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_rcond.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_analyze.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_resymbol.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_spsolve.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_rcond.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_solve.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_postorder.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_amd.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_ltsolve_template.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_rowcolcounts.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_etree.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_amd.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_spsolve.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_resymbol.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_rowfac.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_analyze.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_lsolve_template.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_factorize.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_postorder.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_rowcolcounts.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_resymbol_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_rowfac.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_factorize.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_l_colamd.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_spsolve_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_solve_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_colamd.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_psolve_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/t_cholmod_rcond_worker.c

src/SuiteSparse/CHOLMOD/Cholesky/cholmod_solve.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_sdmult.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_symmetry.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_drop_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_ssmult.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_symmetry.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_scale.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_vertcat.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_horzcat_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_drop.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_horzcat.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_norm.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_scale.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_scale_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_ssmult_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_norm.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_drop.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_vertcat_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_submatrix.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_ssmult.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_horzcat.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_l_submatrix.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_sdmult.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_sdmult_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/cholmod_vertcat.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_submatrix_worker.c

src/SuiteSparse/CHOLMOD/MatrixOps/t_cholmod_norm_worker.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_solve.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_numeric.c

src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_solve_worker.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_super_symbolic.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_l_super_solve.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_l_super_numeric.c

src/SuiteSparse/CHOLMOD/Supernodal/t_cholmod_super_numeric_worker.c

src/SuiteSparse/CHOLMOD/Supernodal/cholmod_l_super_symbolic.c

src/SuiteSparse/CHOLMOD/Include/cholmod_internal.h

src/SuiteSparse/CHOLMOD/Include/cholmod_template.h

src/SuiteSparse/CHOLMOD/Include/cholmod.h

src/SuiteSparse/CHOLMOD/Include/cholmod_types.h

src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.h

src/SuiteSparse/SuiteSparse_config/SuiteSparse_config.c

src/SuiteSparse/SuiteSparse_config/Makefile

src/SuiteSparse/COLAMD/Makefile

src/SuiteSparse/COLAMD/Source/colamd_l.c

src/SuiteSparse/COLAMD/Source/colamd_version.c

src/SuiteSparse/COLAMD/Source/colamd.c

src/SuiteSparse/COLAMD/Include/colamd.h

src/SuiteSparse/CXSparse/Makefile

src/SuiteSparse/CXSparse/Source/cs_cl_counts.c

src/SuiteSparse/CXSparse/Source/cs_dl_reach.c

src/SuiteSparse/CXSparse/Source/cs_ci_malloc.c

src/SuiteSparse/CXSparse/Source/cs_ci_entry.c

src/SuiteSparse/CXSparse/Source/cs_permute.c

src/SuiteSparse/CXSparse/Source/cs_ci_pinv.c

src/SuiteSparse/CXSparse/Source/cs_dl_spsolve.c

src/SuiteSparse/CXSparse/Source/cs_dupl.c

src/SuiteSparse/CXSparse/Source/cs_ci_ereach.c

src/SuiteSparse/CXSparse/Source/cs_ci_scc.c

src/SuiteSparse/CXSparse/Source/cs_dl_ipvec.c

src/SuiteSparse/CXSparse/Source/cs_gaxpy.c

src/SuiteSparse/CXSparse/Source/cs_cl_cholsol.c

src/SuiteSparse/CXSparse/Source/cs_ci_lusol.c

src/SuiteSparse/CXSparse/Source/cs_post.c

src/SuiteSparse/CXSparse/Source/cs_dl_randperm.c

src/SuiteSparse/CXSparse/Source/cs_dl_ltsolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_gaxpy.c

src/SuiteSparse/CXSparse/Source/cs_ci_chol.c

src/SuiteSparse/CXSparse/Source/cs_ci_print.c

src/SuiteSparse/CXSparse/Source/cs_cl_transpose.c

src/SuiteSparse/CXSparse/Source/cs_cl_spsolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_amd.c

src/SuiteSparse/CXSparse/Source/cs_ci_scatter.c

src/SuiteSparse/CXSparse/Source/cs_chol.c

src/SuiteSparse/CXSparse/Source/cs_cl_updown.c

src/SuiteSparse/CXSparse/Source/cs_ci_tdfs.c

src/SuiteSparse/CXSparse/Source/cs_cumsum.c

src/SuiteSparse/CXSparse/Source/cs_dmperm.c

src/SuiteSparse/CXSparse/Source/cs_dl_cumsum.c

src/SuiteSparse/CXSparse/Source/cs_ci_transpose.c

src/SuiteSparse/CXSparse/Source/cs_cl_ltsolve.c

src/SuiteSparse/CXSparse/Source/cs_cl_tdfs.c

src/SuiteSparse/CXSparse/Source/cs_pinv.c

src/SuiteSparse/CXSparse/Source/cs_qrsol.c

src/SuiteSparse/CXSparse/Source/cs_cl_happly.c

src/SuiteSparse/CXSparse/Source/cs_cl_dupl.c

src/SuiteSparse/CXSparse/Source/cs_ci_reach.c

src/SuiteSparse/CXSparse/Source/cs_cl_lusol.c

src/SuiteSparse/CXSparse/Source/cs_updown.c

src/SuiteSparse/CXSparse/Source/cs_ci_permute.c

src/SuiteSparse/CXSparse/Source/cs_cl_norm.c

src/SuiteSparse/CXSparse/Source/cs_dl_schol.c

src/SuiteSparse/CXSparse/Source/cs_ci_schol.c

src/SuiteSparse/CXSparse/Source/cs_lusol.c

src/SuiteSparse/CXSparse/Source/cs_entry.c

src/SuiteSparse/CXSparse/Source/cs_dl_sqr.c

src/SuiteSparse/CXSparse/Source/cs_ci_ipvec.c

src/SuiteSparse/CXSparse/Source/cs_dl_dfs.c

src/SuiteSparse/CXSparse/Source/cs_cl_permute.c

src/SuiteSparse/CXSparse/Source/cs_cl_load.c

src/SuiteSparse/CXSparse/Source/cs_dl_dupl.c

src/SuiteSparse/CXSparse/Source/cs_cl_usolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_dupl.c

src/SuiteSparse/CXSparse/Source/cs_multiply.c

src/SuiteSparse/CXSparse/Source/cs_cl_leaf.c

src/SuiteSparse/CXSparse/Source/cs_cl_malloc.c

src/SuiteSparse/CXSparse/Source/cs_ci_util.c

src/SuiteSparse/CXSparse/Source/cs_cl_dmperm.c

src/SuiteSparse/CXSparse/Source/cs_compress.c

src/SuiteSparse/CXSparse/Source/cs_dl_amd.c

src/SuiteSparse/CXSparse/Source/cs_ipvec.c

src/SuiteSparse/CXSparse/Source/cs_ci_spsolve.c

src/SuiteSparse/CXSparse/Source/cs_dl_entry.c

src/SuiteSparse/CXSparse/Source/cs_cl_multiply.c

src/SuiteSparse/CXSparse/Source/cs_cl_qrsol.c

src/SuiteSparse/CXSparse/Source/cs_cl_lsolve.c

src/SuiteSparse/CXSparse/Source/cs_cl_print.c

src/SuiteSparse/CXSparse/Source/cs_dl_pvec.c

src/SuiteSparse/CXSparse/Source/cs_dl_lsolve.c

src/SuiteSparse/CXSparse/Source/cs_amd.c

src/SuiteSparse/CXSparse/Source/cs_happly.c

src/SuiteSparse/CXSparse/Source/cs_cl_dropzeros.c

src/SuiteSparse/CXSparse/Source/cs_pvec.c

src/SuiteSparse/CXSparse/Source/cs_dl_permute.c

src/SuiteSparse/CXSparse/Source/cs_cl_pinv.c

src/SuiteSparse/CXSparse/Source/cs_ci_multiply.c

src/SuiteSparse/CXSparse/Source/cs_fkeep.c

src/SuiteSparse/CXSparse/Source/cs_ereach.c

src/SuiteSparse/CXSparse/Source/cxsparse_version.c

src/SuiteSparse/CXSparse/Source/cs_load.c

src/SuiteSparse/CXSparse/Source/cs_dl_dmperm.c

src/SuiteSparse/CXSparse/Source/cs_cl_utsolve.c

src/SuiteSparse/CXSparse/Source/cs_utsolve.c

src/SuiteSparse/CXSparse/Source/cs_cl_chol.c

src/SuiteSparse/CXSparse/Source/cs_convert.c

src/SuiteSparse/CXSparse/Source/cs_cl_util.c

src/SuiteSparse/CXSparse/Source/cs_add.c

src/SuiteSparse/CXSparse/Source/cs_dl_lu.c

src/SuiteSparse/CXSparse/Source/cs_dl_malloc.c

src/SuiteSparse/CXSparse/Source/cs_ci_dropzeros.c

src/SuiteSparse/CXSparse/Source/cs_cl_maxtrans.c

src/SuiteSparse/CXSparse/Source/cs_ci_lu.c

src/SuiteSparse/CXSparse/Source/cs_ci_post.c

src/SuiteSparse/CXSparse/Source/cs_usolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_house.c

src/SuiteSparse/CXSparse/Source/cs_dl_chol.c

src/SuiteSparse/CXSparse/Source/cs_tdfs.c

src/SuiteSparse/CXSparse/Source/cs_dl_house.c

src/SuiteSparse/CXSparse/Source/cs_cl_randperm.c

src/SuiteSparse/CXSparse/Source/cs_schol.c

src/SuiteSparse/CXSparse/Source/cs_ci_dfs.c

src/SuiteSparse/CXSparse/Source/cs_malloc.c

src/SuiteSparse/CXSparse/Source/cs_dl_happly.c

src/SuiteSparse/CXSparse/Source/cs_cl_scc.c

src/SuiteSparse/CXSparse/Source/cs_ci_lsolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_pvec.c

src/SuiteSparse/CXSparse/Source/cs_cl_entry.c

src/SuiteSparse/CXSparse/Source/cs_cl_pvec.c

src/SuiteSparse/CXSparse/Source/cs_norm.c

src/SuiteSparse/CXSparse/Source/cs_cholsol.c

src/SuiteSparse/CXSparse/Source/cs_ci_ltsolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_maxtrans.c

src/SuiteSparse/CXSparse/Source/cs_ci_droptol.c

src/SuiteSparse/CXSparse/Source/cs_scc.c

src/SuiteSparse/CXSparse/Source/cs_cl_cumsum.c

src/SuiteSparse/CXSparse/Source/cs_cl_gaxpy.c

src/SuiteSparse/CXSparse/Source/cs_maxtrans.c

src/SuiteSparse/CXSparse/Source/cs_dl_transpose.c

src/SuiteSparse/CXSparse/Source/cs_ci_usolve.c

src/SuiteSparse/CXSparse/Source/cs_dl_lusol.c

src/SuiteSparse/CXSparse/Source/cs_ci_fkeep.c

src/SuiteSparse/CXSparse/Source/cs_dl_compress.c

src/SuiteSparse/CXSparse/Source/cs_qr.c

src/SuiteSparse/CXSparse/Source/cs_randperm.c

src/SuiteSparse/CXSparse/Source/cs_print.c

src/SuiteSparse/CXSparse/Source/cs_sqr.c

src/SuiteSparse/CXSparse/Source/cs_dl_util.c

src/SuiteSparse/CXSparse/Source/cs_ci_counts.c

src/SuiteSparse/CXSparse/Source/cs_cl_add.c

src/SuiteSparse/CXSparse/Source/cs_dl_pinv.c

src/SuiteSparse/CXSparse/Source/cs_ci_compress.c

src/SuiteSparse/CXSparse/Source/cs_ci_cumsum.c

src/SuiteSparse/CXSparse/Source/cs_ci_utsolve.c

src/SuiteSparse/CXSparse/Source/cs_ci_cholsol.c

src/SuiteSparse/CXSparse/Source/cs_house.c

src/SuiteSparse/CXSparse/Source/cs_dl_norm.c

src/SuiteSparse/CXSparse/Source/cs_cl_lu.c

src/SuiteSparse/CXSparse/Source/cs_cl_compress.c

src/SuiteSparse/CXSparse/Source/cs_ci_qr.c

src/SuiteSparse/CXSparse/Source/cs_symperm.c

src/SuiteSparse/CXSparse/Source/cs_dropzeros.c

src/SuiteSparse/CXSparse/Source/cs_dl_cholsol.c

src/SuiteSparse/CXSparse/Source/cs_cl_schol.c

src/SuiteSparse/CXSparse/Source/cs_leaf.c

src/SuiteSparse/CXSparse/Source/cs_ci_leaf.c

src/SuiteSparse/CXSparse/Source/cs_dl_scatter.c

src/SuiteSparse/CXSparse/Source/cs_dl_qrsol.c

src/SuiteSparse/CXSparse/Source/cs_dl_etree.c

src/SuiteSparse/CXSparse/Source/cs_dl_multiply.c

src/SuiteSparse/CXSparse/Source/cs_dl_add.c

src/SuiteSparse/CXSparse/Source/cs_ci_add.c

src/SuiteSparse/CXSparse/Source/cs_dl_droptol.c

src/SuiteSparse/CXSparse/Source/cs_dl_tdfs.c

src/SuiteSparse/CXSparse/Source/cs_reach.c

src/SuiteSparse/CXSparse/Source/cs_cl_fkeep.c

src/SuiteSparse/CXSparse/Source/cs_etree.c

src/SuiteSparse/CXSparse/Source/cs_cl_qr.c

src/SuiteSparse/CXSparse/Source/cs_ci_sqr.c

src/SuiteSparse/CXSparse/Source/cs_dl_qr.c

src/SuiteSparse/CXSparse/Source/cs_util.c

src/SuiteSparse/CXSparse/Source/cs_lu.c

src/SuiteSparse/CXSparse/Source/cs_dl_leaf.c

src/SuiteSparse/CXSparse/Source/cs_dl_fkeep.c

src/SuiteSparse/CXSparse/Source/cs_cl_house.c

src/SuiteSparse/CXSparse/Source/cs_ltsolve.c

src/SuiteSparse/CXSparse/Source/cs_cl_etree.c

src/SuiteSparse/CXSparse/Source/cs_ci_dmperm.c

src/SuiteSparse/CXSparse/Source/cs_dl_maxtrans.c

src/SuiteSparse/CXSparse/Source/cs_cl_amd.c

src/SuiteSparse/CXSparse/Source/cs_ci_etree.c

src/SuiteSparse/CXSparse/Source/cs_cl_sqr.c

src/SuiteSparse/CXSparse/Source/cs_dl_gaxpy.c

src/SuiteSparse/CXSparse/Source/cs_cl_scatter.c

src/SuiteSparse/CXSparse/Source/cs_dl_usolve.c

src/SuiteSparse/CXSparse/Source/cs_dl_print.c

src/SuiteSparse/CXSparse/Source/cs_dl_scc.c

src/SuiteSparse/CXSparse/Source/cs_cl_ereach.c

src/SuiteSparse/CXSparse/Source/cs_ci_norm.c

src/SuiteSparse/CXSparse/Source/cs_dl_load.c

src/SuiteSparse/CXSparse/Source/cs_dl_counts.c

src/SuiteSparse/CXSparse/Source/cs_dl_utsolve.c

src/SuiteSparse/CXSparse/Source/cs_transpose.c

src/SuiteSparse/CXSparse/Source/cs_cl_reach.c

src/SuiteSparse/CXSparse/Source/cs_cl_symperm.c

src/SuiteSparse/CXSparse/Source/cs_cl_ipvec.c

src/SuiteSparse/CXSparse/Source/cs_ci_load.c

src/SuiteSparse/CXSparse/Source/cs_droptol.c

src/SuiteSparse/CXSparse/Source/cs_cl_dfs.c

src/SuiteSparse/CXSparse/Source/cs_ci_happly.c

src/SuiteSparse/CXSparse/Source/cs_cl_post.c

src/SuiteSparse/CXSparse/Source/cs_ci_qrsol.c

src/SuiteSparse/CXSparse/Source/cs_dl_symperm.c

src/SuiteSparse/CXSparse/Source/cs_dl_updown.c

src/SuiteSparse/CXSparse/Source/cs_ci_randperm.c

src/SuiteSparse/CXSparse/Source/cs_dfs.c

src/SuiteSparse/CXSparse/Source/cs_dl_post.c

src/SuiteSparse/CXSparse/Source/cs_scatter.c

src/SuiteSparse/CXSparse/Source/cs_dl_ereach.c

src/SuiteSparse/CXSparse/Source/cs_counts.c

src/SuiteSparse/CXSparse/Source/cs_ci_updown.c

src/SuiteSparse/CXSparse/Source/cs_cl_droptol.c

src/SuiteSparse/CXSparse/Source/cs_lsolve.c

src/SuiteSparse/CXSparse/Source/cs_dl_dropzeros.c

src/SuiteSparse/CXSparse/Source/cs_ci_symperm.c

src/SuiteSparse/CXSparse/Source/cs_spsolve.c

src/SuiteSparse/CXSparse/Include/cs.h

src/SuiteSparse/AMD/Makefile

src/SuiteSparse/AMD/Source/amd_l_control.c

src/SuiteSparse/AMD/Source/amd_l_defaults.c

src/SuiteSparse/AMD/Source/amd_1.c

src/SuiteSparse/AMD/Source/amd_2.c

src/SuiteSparse/AMD/Source/amd_l_preprocess.c

src/SuiteSparse/AMD/Source/amd_l_order.c

src/SuiteSparse/AMD/Source/amd_l_info.c

src/SuiteSparse/AMD/Source/amd_version.c

src/SuiteSparse/AMD/Source/amd_postorder.c

src/SuiteSparse/AMD/Source/amd_l1.c

src/SuiteSparse/AMD/Source/amd_defaults.c

src/SuiteSparse/AMD/Source/amd_post_tree.c

src/SuiteSparse/AMD/Source/amd_order.c

src/SuiteSparse/AMD/Source/amd_aat.c

src/SuiteSparse/AMD/Source/amd_control.c

src/SuiteSparse/AMD/Source/amd_preprocess.c

src/SuiteSparse/AMD/Source/amd_l_post_tree.c

src/SuiteSparse/AMD/Source/amd_l_dump.c

src/SuiteSparse/AMD/Source/amd_dump.c

src/SuiteSparse/AMD/Source/amd_info.c

src/SuiteSparse/AMD/Source/amd_l_aat.c

src/SuiteSparse/AMD/Source/amd_l_valid.c

src/SuiteSparse/AMD/Source/amd_l2.c

src/SuiteSparse/AMD/Source/amd_valid.c

src/SuiteSparse/AMD/Source/amd_l_postorder.c

src/SuiteSparse/AMD/Include/amd_internal.h

src/SuiteSparse/AMD/Include/amd.h

src/SuiteSparse/CCOLAMD/Makefile

src/SuiteSparse/CCOLAMD/Source/ccolamd_l.c

src/SuiteSparse/CCOLAMD/Source/ccolamd.c

src/SuiteSparse/CCOLAMD/Source/ccolamd_version.c

src/SuiteSparse/CCOLAMD/Include/ccolamd.h

src/SuiteSparse/CAMD/Makefile

src/SuiteSparse/CAMD/Source/camd_l_info.c

src/SuiteSparse/CAMD/Source/camd_l_dump.c

src/SuiteSparse/CAMD/Source/camd_control.c

src/SuiteSparse/CAMD/Source/camd_l_control.c

src/SuiteSparse/CAMD/Source/camd_preprocess.c

src/SuiteSparse/CAMD/Source/camd_info.c

src/SuiteSparse/CAMD/Source/camd_postorder.c

src/SuiteSparse/CAMD/Source/camd_l_valid.c

src/SuiteSparse/CAMD/Source/camd_l_aat.c

src/SuiteSparse/CAMD/Source/camd_valid.c

src/SuiteSparse/CAMD/Source/camd_l_defaults.c

src/SuiteSparse/CAMD/Source/camd_dump.c

src/SuiteSparse/CAMD/Source/camd_l_order.c

src/SuiteSparse/CAMD/Source/camd_order.c

src/SuiteSparse/CAMD/Source/camd_version.c

src/SuiteSparse/CAMD/Source/camd_l1.c

src/SuiteSparse/CAMD/Source/camd_defaults.c

src/SuiteSparse/CAMD/Source/camd_l_postorder.c

src/SuiteSparse/CAMD/Source/camd_1.c

src/SuiteSparse/CAMD/Source/camd_l_preprocess.c

src/SuiteSparse/CAMD/Source/camd_2.c

src/SuiteSparse/CAMD/Source/camd_l2.c

src/SuiteSparse/CAMD/Source/camd_aat.c

src/SuiteSparse/CAMD/Include/camd_internal.h

src/SuiteSparse/CAMD/Include/camd.h

inst/COPYRIGHTS

inst/include/cholmod.h

inst/doc/ngme2-documentation.R inst/doc/ngme2-documentation.Rmd

inst/doc/ngme2-documentation.html

build/vignette.rds

build/partial.rdb

tests/testthat.R tests/demo/matern-script.R tests/demo/demo_meuse.R tests/demo/demo_replicate.R tests/demo/README.md tests/demo/compare_inla.R tests/demo/matern-script-2.R tests/demo/demo_parana.R tests/demo/demo_hessian_thetaK.R tests/demo/demo_argo.R tests/testthat/test-api-prior-calibration.R tests/testthat/test-core-noise.R tests/testthat/test-api-control-opt-batch-ci.R tests/testthat/helper-fixtures.R tests/testthat/test-compose-bv.R tests/testthat/test-regression-cv-rebuild-data-env.R tests/testthat/test-plot-posterior.R tests/testthat/test-core-generic-ns.R tests/testthat/test-compose-tp-bv-matern.R tests/testthat/test-plot-traceplot.R tests/testthat/test-predict-response-samples.R tests/testthat/test-api-f-refactor.R tests/testthat/test-core-model-defs.R tests/testthat/test-regression-fe-rank-check.R tests/testthat/Rplots.pdf tests/testthat/test-compose-sum-ar1-matern.R tests/testthat/test-core-noise-moments.R tests/testthat/test-api-par-names.R tests/testthat/test-core-fractional-model.R tests/testthat/test-regression-robust.R tests/testthat/test-predict-chain-average.R tests/testthat/test-api-prior.R tests/testthat/test-api-control-opt-start-guard.R tests/testthat/test-api-re-model.R tests/testthat/test-core-var1-operator.R tests/testthat/test-predict-normal-nig.R tests/testthat/test-core-generic.R tests/testthat/test-regression-bv-c-param.R tests/testthat/fixtures/README.md vignettes/ngme2-documentation.Rmd

data/argo_float.rda

data/pm25_quarterly_2022.rda

data/cienaga.border.rda

data/cienaga.rda

man/summary.ngme_batch_ci.Rd man/ngme.Rd man/create_paired_cv_splits.Rd man/stepsize_decay.Rd man/momentum.Rd man/ngme_optimizers.Rd man/generic.Rd man/f.Rd man/generic_ns.Rd man/precision_matrix_multivariate_spde.Rd man/ngme_make_mesh_repls.Rd man/prior_inv_exponential.Rd man/simulate.ngme_noise.Rd man/ARcov.Rd man/ngme_as_sparse.Rd man/posterior_plot.Rd man/simulate.ngme.Rd man/ngme_ts_make_A.Rd man/sgd.Rd man/calibrate_inv_exp_lambda_driven_nig.Rd man/plot.ngme_noise.Rd man/get_noise_param.Rd man/openmp_test.Rd man/plot.parameter_distance.Rd man/control_ngme.Rd man/rw2.Rd man/adamW.Rd man/ngme_sgld_samples.Rd man/ngme_noise.Rd man/argo_float.Rd man/ngme_sgld_ci.Rd man/batch_decay.Rd man/predict.ngme.Rd man/ngme2.Rd man/tp.Rd man/ngme_model_types.Rd man/rmsprop.Rd man/ngme_prior_types.Rd man/bv.Rd man/test_ngme.Rd man/var1.Rd man/prior_none.Rd man/batch_means_estimator.Rd man/control_opt.Rd man/ngme_update.Rd man/re.Rd man/priors.Rd man/mean_list.Rd man/control_opt_batch_ci.Rd man/sgld.Rd man/ig.Rd man/print.ngme_model.Rd man/get_data_from_formula.Rd man/ar.Rd man/compute_log_like.Rd man/merge_noise.Rd man/cienaga.border.Rd man/ngme_noise_types.Rd man/batch_means_ci.Rd man/bfgs.Rd man/arma.Rd man/adaptive_gd.Rd man/nig.Rd man/ngme_post_samples.Rd man/noise_moments.Rd man/get_trace_trajectories.Rd man/precision_matrix_multivariate.Rd man/compute_ngme_ci.Rd man/ngme_cov_matrix.Rd man/arma11.Rd man/traceplot.Rd man/matern.Rd man/adam.Rd man/gal.Rd man/print.ngme.Rd man/stepsize_control.Rd man/rw1.Rd man/spacetime.Rd man/pm25_quarterly_2022.Rd man/compare_noise_kld.Rd man/stepsize_schedule.Rd man/prior_normal.Rd man/compute_score_given_pred.Rd man/print.ngme_trajectories.Rd man/summary.ngme.Rd man/prior_half_cauchy.Rd man/cienaga.Rd man/gig.Rd man/print.ngme_replicate.Rd man/cross_validation.Rd man/get_parameter_distance.Rd man/compute_ngme_sgld_samples.Rd man/ngme_result.Rd man/get_trajectories.Rd man/compute_index_corr_from_map.Rd man/print.ngme_noise.Rd man/simulate.ngme_model.Rd man/print.noise_kld_comparison.Rd man/bv_matern.Rd man/print.ngme_operator.Rd man/ngme_batch_ci.Rd man/ar1.Rd man/prior_pc_sd.Rd man/ou.Rd man/merge_replicates.Rd man/precond_sgd.Rd man/print.parameter_distance.Rd man/poly_decay.Rd man/ngme_parse_formula.Rd man/make_time_series_cv_index.Rd man/name2fun.Rd man/iid.Rd man/adagrad.Rd man/igam.Rd

man/figures/logo.png

ngme2 documentation built on May 20, 2026, 9:10 a.m.