ngspatial: Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data
Version 1.1-3

Provides tools for analyzing spatial data, especially non-Gaussian areal data. The current version supports the sparse spatial generalized linear mixed model of Hughes and Haran (2013) and the centered autologistic model of Caragea and Kaiser (2009) .

Browse man pages Browse package API and functions Browse package files

AuthorJohn Hughes <jphughesjr@gmail.com> and Xiaohui Cui
Date of publication2017-01-02 17:55:18
MaintainerJohn Hughes <jphughesjr@gmail.com>
LicenseGPL (>= 2)
Version1.1-3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ngspatial")

Man pages

A: Adjacency matrix for the infant mortality data.
adjacency.matrix: Return an adjacency matrix for a square lattice.
autologistic: Fit a centered autologistic model using maximum...
infant: Infant mortality data.
rautologistic: Return a perfect sample from a centered autologistic model.
residuals.autologistic: Extract model residuals.
residuals.sparse.sglmm: Extract model residuals.
sparse.sglmm: Fit a sparse SGLMM.
summary.autologistic: Print a summary of a centered autologistic model fit.
summary.sparse.sglmm: Print a summary of a sparse SGLMM fit.
vcov.autologistic: Return the estimated covariance matrix for an 'autologistic'...
vcov.sparse.sglmm: Return the covariance matrix of the regression parameters of...

Functions

A Man page
Moller.run Source code
Moller.train Source code
adjacency.matrix Man page Source code
autologistic Man page Source code
autologistic.bmse Source code
autologistic.bootstrap Source code
autologistic.bootstrap.helper Source code
autologistic.control Source code
autologistic.fit Source code
autologistic.grad Source code
autologistic.logPL Source code
autologistic.sandwich Source code
autologistic.sandwich.helper Source code
hpd Source code
infant Man page
is.wholenumber Source code
is.zero Source code
onAttach Source code
rand.walk Source code
rand.walk.train Source code
rautologistic Man page Source code
residuals.autologistic Man page Source code
residuals.sparse.sglmm Man page Source code
sparse.sglmm Man page Source code
sparse.sglmm.fit.binomial Source code
sparse.sglmm.fit.gaussian Source code
sparse.sglmm.fit.poisson Source code
summary.autologistic Man page Source code
summary.sparse.sglmm Man page Source code
vcov.autologistic Man page Source code
vcov.sparse.sglmm Man page Source code

Files

COPYING
inst
inst/CITATION
src
src/Makevars
src/moller.cpp
src/perfsampler.h
src/perfsampler.cpp
src/moller.h
NAMESPACE
data
data/A.rda
data/infant.txt.gz
R
R/moller.R
R/autologistic.R
R/sparse.sglmm.R
R/misc.R
R/zzz.R
MD5
DESCRIPTION
man
man/infant.Rd
man/residuals.autologistic.Rd
man/vcov.autologistic.Rd
man/vcov.sparse.sglmm.Rd
man/summary.autologistic.Rd
man/rautologistic.Rd
man/adjacency.matrix.Rd
man/summary.sparse.sglmm.Rd
man/autologistic.Rd
man/residuals.sparse.sglmm.Rd
man/sparse.sglmm.Rd
man/A.Rd
ngspatial documentation built on May 19, 2017, 1:26 p.m.