ngspatial: Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data

Provides tools for analyzing spatial data, especially non-Gaussian areal data. The current version supports the sparse spatial generalized linear mixed model of Hughes and Haran (2013) <DOI:10.1111/j.1467-9868.2012.01041.x> and the centered autologistic model of Caragea and Kaiser (2009) <DOI:10.1198/jabes.2009.07032>.

Author
John Hughes <jphughesjr@gmail.com> and Xiaohui Cui
Date of publication
2016-11-23 00:36:47
Maintainer
John Hughes <jphughesjr@gmail.com>
License
GPL (>= 2)
Version
1.1-2

View on CRAN

Man pages

A
Adjacency matrix for the infant mortality data.
adjacency.matrix
Return an adjacency matrix for a square lattice.
autologistic
Fit a centered autologistic model using maximum...
infant
Infant mortality data.
rautologistic
Return a perfect sample from a centered autologistic model.
residuals.autologistic
Extract model residuals.
residuals.sparse.sglmm
Extract model residuals.
sparse.sglmm
Fit a sparse SGLMM.
summary.autologistic
Print a summary of a centered autologistic model fit.
summary.sparse.sglmm
Print a summary of a sparse SGLMM fit.
vcov.autologistic
Return the estimated covariance matrix for an 'autologistic'...
vcov.sparse.sglmm
Return the covariance matrix of the regression parameters of...

Files in this package

ngspatial
ngspatial/COPYING
ngspatial/inst
ngspatial/inst/CITATION
ngspatial/src
ngspatial/src/Makevars
ngspatial/src/moller.cpp
ngspatial/src/perfsampler.h
ngspatial/src/perfsampler.cpp
ngspatial/src/moller.h
ngspatial/NAMESPACE
ngspatial/data
ngspatial/data/A.rda
ngspatial/data/infant.txt.gz
ngspatial/R
ngspatial/R/moller.R
ngspatial/R/autologistic.R
ngspatial/R/sparse.sglmm.R
ngspatial/R/misc.R
ngspatial/R/zzz.R
ngspatial/MD5
ngspatial/DESCRIPTION
ngspatial/man
ngspatial/man/infant.Rd
ngspatial/man/residuals.autologistic.Rd
ngspatial/man/vcov.autologistic.Rd
ngspatial/man/vcov.sparse.sglmm.Rd
ngspatial/man/summary.autologistic.Rd
ngspatial/man/rautologistic.Rd
ngspatial/man/adjacency.matrix.Rd
ngspatial/man/summary.sparse.sglmm.Rd
ngspatial/man/autologistic.Rd
ngspatial/man/residuals.sparse.sglmm.Rd
ngspatial/man/sparse.sglmm.Rd
ngspatial/man/A.Rd