| bin_env | Helper function to prepare bin tables |
| bin_ml_rec | Maximum likelihood reconstruction of ancestral character... |
| bin_par_rec | Maximum parsimony reconstruction of ancestral character... |
| bin_table | Bin table of environmental conditions in M and for... |
| bin_tables | Bin tables of environmental conditions in M and for... |
| bin_tables0 | Bin tables of environmental conditions in M and for... |
| character_table | Example of character table for six species |
| hist_evalues | Histograms of environmental conditions in M and for... |
| histograms_env | Histograms of environmental conditions in M and for... |
| m | Example of accessible areas for a species |
| map_nichevol | Maps of niche reconstructions and changes detected |
| niche_bars | PNG bar figures to represent ecological niches of distinct... |
| niche_labels | Labels to represent niches of tips and ancestors |
| niche_legend | Legends for niche labels in phylogenetic trees |
| nichevol | nichevol: Assessment of Species’ Ecological Niche Evolution... |
| nichevol_bars | PNG bar figures for representing niche evolution |
| nichevol_labels | Labels to represent changes of niche characteristics between... |
| nichevol_legend | Legends for niche evolution labels in phylogenetic trees |
| occ_list | Example of occurrence records for six species |
| par_rec_table | Example of table with results from parsimony reconstructions |
| pdf_histograms | Helper function to create PDF files with histograms |
| read_bin_table | Read tables of binary niche characters from directory |
| rename_tips | Helper function to rename tips of trees for simulations |
| score_tip | Helper function to calculate the median bin score for a given... |
| score_tree | Helper function to assign bin scores to every tip in a given... |
| set_uncertainty | Set values of uncertainty towards one or both ends of the... |
| sig_sq | Helper function to get sigma squared values for a given... |
| smooth_rec | Smooth character table values resulted from ancestral... |
| stats_eval | Statistics of environmental conditions in M and for... |
| stats_evalues | Statistics of environmental conditions in M and for... |
| temp | Example of an environmental variable used in analysis |
| tree | Example of a phylogenetic tree for six species |
| tree5 | Example of a phylogenetic tree for five species |
| tree_data | Example of a list containing a tree and a table of characters... |
