The NOIA model, as described extensively in Alvarez-Castro & Carlborg (2007), is a framework facilitating the estimation of genetic effects and genotype-to-phenotype maps. This package provides the basic tools to perform linear and multilinear regressions from real populations (provided the phenotype and the genotype of every individuals), estimating the genetic effects from different reference points, the genotypic values, and the decomposition of genetic variances in a multi-locus, 2 alleles system. This package is presented in Le Rouzic & Alvarez-Castro (2008).
|Author||Arnaud Le Rouzic (2007-2014), Arne B. Gjuvsland (2010), Olivier Ariste (2010)|
|Date of publication||2015-01-08 18:21:15|
|Maintainer||Arnaud Le Rouzic <email@example.com>|
A_noia-package: Implementation of the Natural and Orthogonal InterAction...
B_geneticRegression: Linear and Multilinear Genetic Regressions
C_GPmapanalysis: Noia analysis of genotype-to-phenotype (GP) maps in ideal...
effectsNames: Names of Genetic Effects
geneticEffects: Genetic Effects
genotypesNames: Names of Genotypes
GPmap: Genotype-to-Phenotype Mapping
plotNoia: Graphical display of genetic regressions and...
printNoia: Printing Genetic Regressions and GP map analyses
simulatePop: Simulates a Population from a Genotype-Phenotype Map
varianceDecomposition: Decomposition of Genetic Variance