oXim: Oxycline Index from Matrix Echograms

Tools for oxycline depth calculation from echogram matrices.

Install the latest version of this package by entering the following in R:
install.packages("oXim")
AuthorWencheng Lau-Medrano [aut, cre], Ricardo Oliveros-Ramos [ctb]
Date of publication2017-03-23 13:47:22 UTC
MaintainerWencheng Lau-Medrano <luis.laum@gmail.com>
LicenseGPL (>= 2)
Version1.2.1
https://github.com/LuisLauM/oXim

View on CRAN

Functions

colPalette Man page
createFilterSetting Man page
defaultFilterSettings Man page
echogramPlot Man page
echogramPlot.default Man page
echogramPlot.echoData Man page
echogramPlot.matrix Man page
echogramPlot.oxyclineData Man page
getOxyrange Man page
oXim Man page
oXim-package Man page
plot.echoData Man page
plot.oxyclineData Man page
print.echoData Man page
print.oxyclineData Man page
print.summary.echoData Man page
print.summary.oxyclineData Man page
readEchograms Man page
summary.echoData Man page
summary.oxyclineData Man page

Files

inst
inst/extdata
inst/extdata/blue38.mat
inst/extdata/fish38.mat
inst/extdata/fluid120.mat
inst/doc
inst/doc/vignette.Rmd
inst/doc/vignette.R
inst/doc/vignette.html
NAMESPACE
demo
demo/00Index
demo/calculate_oxycline_limits.R demo/methods_oxyclineData.R demo/methods_echoData.R demo/create_filter_configuration.R demo/read_echoData.R
data
data/colPalette.RData
data/defaultFilterSettings.RData
R
R/oxyclineData-internal.R R/oXim-main.R R/echoData-class.R R/oXim-internal.R R/auxiliar.R R/oxyclineData-class.R
vignettes
vignettes/vignette_cache
vignettes/vignette_cache/html
vignettes/vignette_cache/html/unnamed-chunk-7_9f403fae10ff7304bad716657a27b4e7.RData
vignettes/vignette_cache/html/unnamed-chunk-7_9f403fae10ff7304bad716657a27b4e7.rdx
vignettes/vignette_cache/html/unnamed-chunk-3_ccf9ce7567b0d833c5dd0791c366e4a2.rdb
vignettes/vignette_cache/html/__packages
vignettes/vignette_cache/html/unnamed-chunk-3_ccf9ce7567b0d833c5dd0791c366e4a2.rdx
vignettes/vignette_cache/html/unnamed-chunk-7_9f403fae10ff7304bad716657a27b4e7.rdb
vignettes/vignette_cache/html/unnamed-chunk-3_ccf9ce7567b0d833c5dd0791c366e4a2.RData
vignettes/vignette.Rmd
vignettes/vignette_files
vignettes/vignette_files/figure-html
vignettes/vignette_files/figure-html/unnamed-chunk-10-1.png
vignettes/vignette_files/figure-html/unnamed-chunk-6-1.png
MD5
build
build/vignette.rds
DESCRIPTION
man
man/readEchograms.Rd man/summary.oxyclineData.Rd man/print.summary.oxyclineData.Rd man/echogramPlot.echoData.Rd man/print.summary.echoData.Rd man/plot.oxyclineData.Rd man/plot.echoData.Rd man/getOxyrange.Rd man/print.echoData.Rd man/summary.echoData.Rd man/echogramPlot.Rd man/defaultFilterSettings.Rd man/oXim-package.Rd man/print.oxyclineData.Rd man/echogramPlot.oxyclineData.Rd man/colPalette.Rd man/createFilterSetting.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.