ocean: Biophysical Oceanography Tools
Version 0.2-4

This package contains a set of functions for manipulating and visualizing output from numerical ocean models. Many of the routines are targeted towards Lagrangian particle-tracking models with the data stored in NetCDF files. This package may be useful to spatial marine ecologists and biological or physical oceanographers.

Browse man pages Browse package API and functions Browse package files

AuthorBenjamin Jones [aut, cre]
Date of publication2014-05-01 07:44:59
MaintainerBenjamin Jones <btjones16@gmail.com>
LicenseGPL-3
Version0.2-4
URL https://github.com/btjones16/ocean
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ocean")

Man pages

bathy.colors: Generate a sequence of colors for plotting bathymetric data.
filter2d: Applies a 2d Gaussian filter to 'mat' with a standard...
find.elem-methods: Checks if the points (xy$x, xy$y) are in the 'fvcom.grid'...
fvcom.grid: Create a new FVCOM grid instance from a FVCOM NetCDF output...
fvcom.grid-class: Finite Volume Community Ocean Model grid
get.depth-methods: Get the depth at each node in the grid.
get.elems-methods: Get the indices of the element vertices in the grid.
get.nelems-methods: Get the number of elements in the grid.
get.nnodes-methods: Get the number of nodes in the grid.
get.nodes-methods: Get the values of the nodes in the grid.
get.proj-methods: Get the value of the projection string.
image-methods: Plot a 'fvcom.grid' instance as a heatmap.
interp-methods: Convert a single scalar or node based quantity to element...
is.in.grid-methods: Checks if the points (xy$x, xy$y) are in the 'fvcom.grid'...
jet.colors: Generate a sequence of colors alog the jet colormap.
lines-methods: Plot an instance of the 'fvcom.grid' class and overlay the...
loadFVCOMGrid27: Load an FVCOM grid from a NetCDF output file.
ocean.demo.grid: An example instance of the 'fvcom.grid' class.
pdd-methods: Plot the density of x and y on grid.
validFVCOMGrid: Check if a 'fvcom.grid' instance is valid.

Functions

bathy.colors Man page
filter2d Man page
find.elem Man page
find.elem,fvcom.grid-method Man page
fvcom.grid Man page
fvcom.grid-class Man page
get.depth Man page
get.depth,fvcom.grid-method Man page
get.elems Man page
get.elems,fvcom.grid-method Man page
get.nelems Man page
get.nelems,fvcom.grid-method Man page
get.nnodes Man page
get.nnodes,fvcom.grid-method Man page
get.nodes Man page
get.nodes,fvcom.grid-method Man page
get.proj Man page
get.proj,fvcom.grid-method Man page
image Man page
image,fvcom.grid-method Man page
interp Man page
interp,fvcom.grid-method Man page
is.in.grid Man page
is.in.grid,fvcom.grid-method Man page
jet.colors Man page
lines Man page
lines,fvcom.grid-method Man page
loadFVCOMGrid27 Man page
ocean.demo.grid Man page
pdd Man page
pdd,fvcom.grid-method Man page
validFVCOMGrid Man page

Files

ocean
ocean/src
ocean/src/ocean.c
ocean/NAMESPACE
ocean/NEWS
ocean/data
ocean/data/ocean_demo_grid.rda
ocean/R
ocean/R/filter2d.R
ocean/R/fvcom_grid.R
ocean/R/color_ramps.R
ocean/MD5
ocean/DESCRIPTION
ocean/man
ocean/man/pdd-methods.Rd
ocean/man/validFVCOMGrid.Rd
ocean/man/lines-methods.Rd
ocean/man/fvcom.grid-class.Rd
ocean/man/interp-methods.Rd
ocean/man/get.nnodes-methods.Rd
ocean/man/is.in.grid-methods.Rd
ocean/man/image-methods.Rd
ocean/man/ocean.demo.grid.Rd
ocean/man/get.proj-methods.Rd
ocean/man/bathy.colors.Rd
ocean/man/loadFVCOMGrid27.Rd
ocean/man/find.elem-methods.Rd
ocean/man/filter2d.Rd
ocean/man/fvcom.grid.Rd
ocean/man/get.nelems-methods.Rd
ocean/man/get.nodes-methods.Rd
ocean/man/jet.colors.Rd
ocean/man/get.elems-methods.Rd
ocean/man/get.depth-methods.Rd
ocean documentation built on Jan. 15, 2017, 4:16 p.m.