opal.resource_extension_create: Create an extended resource reference in a project

In opalr: 'Opal' Data Repository Client and 'DataSHIELD' Utils

Create an extended resource reference in a project

Description

Create an extended resource reference in a project

Usage

opal.resource_extension_create(
  opal,
  project,
  name,
  provider,
  factory,
  parameters,
  description = NULL,
  credentials = NULL
)

Arguments

opal	Opal object.
project	Name of the project.
name	Name of the resource in the project.
provider	Name of the R package in which the resource is defined.
factory	Name of the JS function that turns parameters and credentials into a resource object.
parameters	A named list of the resource parameters.
description	The description of the resource (optional).
credentials	A named list of the resource credentials (optional).

See Also

Other resource functions: opal.resource_create(), opal.resource_delete(), opal.resource_exists(), opal.resource_get(), opal.resource_perm_add(), opal.resource_perm_delete(), opal.resource_perm(), opal.resources_perm_add(), opal.resources_perm_delete(), opal.resources_perm(), opal.resources(), opal.resource()

Examples

## Not run: 
o <- opal.login('administrator','password', url='https://opal-demo.obiba.org')
opal.resource_extension_create(o, 'RSRC', 'ga4gh_1000g',
  provider = 'dsOmics', factory = 'ga4gh-htsget',
  parameters = list(
    host = 'https://htsget.ga4gh.org',
    sample = '1000genomes.phase1.chr1',
    reference = '1',
    start = '1',
    end = '100000',
    format = 'GA4GHVCF'
  )
)
opal.logout(o)

## End(Not run)

opalr documentation built on Oct. 6, 2023, 5:08 p.m.