overlap: Estimates of Coefficient of Overlapping for Animal Activity Patterns

Provides functions to fit kernel density functions to data on temporal activity patterns of animals; estimate coefficients of overlapping of densities for two species; and calculate bootstrap estimates of confidence intervals.

Install the latest version of this package by entering the following in R:
install.packages("overlap")
AuthorMike Meredith and Martin Ridout
Date of publication2017-03-01 08:36:33
MaintainerMike Meredith <mmeredith@wcs.org>
LicenseGPL (>= 3)
Version0.2.7

View on CRAN

Files

inst
inst/tests
inst/tests/testthat
inst/tests/testthat/test-all.R
inst/doc
inst/doc/overlap.pdf
inst/doc/overlap.Rnw
inst/doc/overlap.R
src
src/densRad.c
src/init.c
NAMESPACE
NEWS
data
data/simulatedData.rda
data/kerinci.rda
R
R/overlapPlot.R R/overlapEst.R R/bootCI.R R/getBandWidth.R R/Resample.R R/densityPlot.R R/bootEst.R R/overlapTrue.R R/miscPlottingUtils.R R/densityFit.R
vignettes
vignettes/overlap.Rnw
vignettes/overlap.bib
MD5
README
build
build/vignette.rds
DESCRIPTION
man
man/figures
man/figures/pig.jpg
man/figures/tiger.jpg
man/figures/Dhat1.jpg
man/figures/Dhat4.jpg
man/figures/tigNpig.jpg
man/figures/Dhat5.jpg
man/figures/Delta.jpg
man/figures/overlap.jpg
man/bootEst.Rd man/overlapEst.Rd man/simulatedData.Rd man/overlapPlot.Rd man/densityFit.Rd man/overlapTrue.Rd man/getBandWidth.Rd man/densityPlot.Rd man/example_data.Rd man/overlap-package.Rd man/bootCI.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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