Provides functions to fit kernel density functions to data on temporal activity patterns of animals; estimate coefficients of overlapping of densities for two species; and calculate bootstrap estimates of confidence intervals.

Author | Mike Meredith and Martin Ridout |

Date of publication | 2016-02-14 17:30:24 |

Maintainer | Mike Meredith <mmeredith@wcs.org> |

License | GPL (>= 3) |

Version | 0.2.6 |

**bootCI:** Confidence interval calculation from bootstrap samples.

**bootEst:** Functions to generate bootstrap estimates of overlap

**densityFit:** Fits von Mises kernel density to time-of-day data.

**densityPlot:** Plot fitted kernel densities

**example_data:** Times of 'capture' of large mammals

**getBandWidth:** Optimal bandwidth calculation

**overlapEst:** Estimates of coefficient of overlapping

**overlap-package:** Functions to estimate overlap of temporal activity patterns...

**overlapPlot:** Plot overlapping kernel densities

**overlapTrue:** Calculates the true coefficient of overlapping between two...

**simulatedData:** Simulated data for diurnal activity patterns

overlap

overlap/inst

overlap/inst/tests

overlap/inst/tests/testthat

overlap/inst/tests/testthat/test-all.R

overlap/inst/doc

overlap/inst/doc/overlap.pdf

overlap/inst/doc/overlap.Rnw

overlap/inst/doc/overlap.R

overlap/src

overlap/src/densRad.c

overlap/NAMESPACE

overlap/NEWS

overlap/data

overlap/data/simulatedData.rda

overlap/data/kerinci.rda

overlap/R

overlap/R/overlapPlot.R
overlap/R/overlapEst.R
overlap/R/bootCI.R
overlap/R/getBandWidth.R
overlap/R/Resample.R
overlap/R/densityPlot.R
overlap/R/bootEst.R
overlap/R/overlapTrue.R
overlap/R/miscPlottingUtils.R
overlap/R/densityFit.R
overlap/vignettes

overlap/vignettes/overlap.Rnw

overlap/vignettes/overlap.bib

overlap/MD5

overlap/README

overlap/build

overlap/build/vignette.rds

overlap/DESCRIPTION

overlap/man

overlap/man/figures

overlap/man/figures/pig.jpg

overlap/man/figures/tiger.jpg

overlap/man/figures/Dhat1.jpg

overlap/man/figures/Dhat4.jpg

overlap/man/figures/tigNpig.jpg

overlap/man/figures/Dhat5.jpg

overlap/man/figures/Delta.jpg

overlap/man/figures/overlap.jpg

overlap/man/bootEst.Rd
overlap/man/overlapEst.Rd
overlap/man/simulatedData.Rd
overlap/man/overlapPlot.Rd
overlap/man/densityFit.Rd
overlap/man/overlapTrue.Rd
overlap/man/getBandWidth.Rd
overlap/man/densityPlot.Rd
overlap/man/example_data.Rd
overlap/man/overlap-package.Rd
overlap/man/bootCI.Rd
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