dominant1 | R Documentation |
A dataset with SNP genotypes for 14 members of a pedigree affected with a dominant disorder.
dominant1
A list with 3 elements:
ped
: A pedtools::ped object describing a pedigree with 19 individuals, including genotypes for 14 members at 248 markers on Chromosome 1.
aff
: A vector indicating the affected pedigree members.
map
: A data frame with 3 columns (chrom
, marker
, cm
) describing the centiMorgan positions of the markers.
data(dominant1) ped = dominant1$ped aff = dominant1$aff model = diseaseModel("AD") # Compute singlepoint LODs lods = lod(ped, aff = aff, model = model) # LOD score graph plot(lods)
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