pastecs: Package for Analysis of Space-Time Ecological Series

Regulation, decomposition and analysis of space-time series. The pastecs library is a PNEC-Art4 and IFREMER (Benoit Beliaeff <Benoit.Beliaeff@ifremer.fr>) initiative to bring PASSTEC 2000 (http://www.obs-vlfr.fr/~enseigne/anado/passtec/passtec.htm) functionalities to R.

AuthorPhilippe Grosjean [aut, cre], Frederic Ibanez [aut], Michele Etienne [ctb]
Date of publication2014-03-02 14:01:51
MaintainerPhilippe Grosjean <phgrosjean@sciviews.org>
LicenseGPL (>= 2)
Version1.3-18
http://www.sciviews.org/pastecs

View on CRAN

Man pages

abund: Sort variables by abundance

AutoD2: AutoD2, CrossD2 or CenterD2 analysis of a multiple...

bnr: A data frame of 163 benthic species measured across a...

buysbal: Buys-Ballot table

daystoyears: Convert time units from "days" to "years" or back

decaverage: Time series decomposition using a moving average

deccensus: Time decomposition using the CENSUS II method

decdiff: Time series decomposition using differences (trend...

decevf: Time series decomposition using eigenvector filtering (EVF)

decloess: Time series decomposition by the LOESS method

decmedian: Time series decomposition using a running median

decreg: Time series decomposition using a regression model

disjoin: Complete disjoined coded data (binary coding)

disto: Compute and plot a distogram

escouf: Choose variables using the Escoufier's equivalent vectors...

extract: Extract a subset of the original dataset

first: Get the first element of a vector

GetUnitText: Format a nice time units for labels in graphs

gleissberg.table: Table of probabilities according to the Gleissberg...

is.tseries: Is this object a time series?

last: Get the last element of a vector

local.trend: Calculate local trends using cumsum

marbio: Several zooplankton taxa measured across a transect

marphy: Physico-chemical records at the same stations as for marbio

match.tol: Determine matching observation with a tolerance in time-scale

pennington: Calculate Pennington statistics

pgleissberg: Gleissberg distribution probability

regarea: Regulate a series using the area method

regconst: Regulate a series using the constant value method

reglin: Regulation of a series using a linear interpolation

regspline: Regulation of a time series using splines

regul: Regulation of one or several time series using various...

regul.adj: Adjust regulation parameters

regul.screen: Test various regulation parameters

releve: A data frame of six phytoplankton taxa followed in time at...

specs: Collect parameters ("specifications") from one object to use...

stat.desc: Descriptive statistics on a data frame or time series

stat.pen: Pennington statistics on a data frame or time series

stat.slide: Sliding statistics

trend.test: Test if an increasing or decreasing trend exists in a time...

tsd: Decomposition of one or several regular time series using...

tseries: Convert a 'regul' or a 'tsd' object into a time series

turnogram: Calculate and plot a turnogram for a regular time series

turnpoints: Analyze turning points (peaks or pits)

vario: Compute and plot a semi-variogram

Files in this package

pastecs
pastecs/inst
pastecs/inst/pastecs-Ex.R
pastecs/inst/doc
pastecs/inst/doc/pastecs.pdf
pastecs/NAMESPACE
pastecs/data
pastecs/data/releve.rda
pastecs/data/gleissberg.table.rda
pastecs/data/marphy.rda
pastecs/data/marbio.rda
pastecs/data/bnr.rda
pastecs/R
pastecs/R/first.R pastecs/R/pgleissberg.R pastecs/R/print.summary.turnpoints.R pastecs/R/print.stat.slide.R pastecs/R/identify.local.trend.R pastecs/R/extract.turnpoints.R pastecs/R/CenterD2.R pastecs/R/summary.turnpoints.R pastecs/R/turnpoints.R pastecs/R/match.tol.R pastecs/R/lines.escouf.R pastecs/R/CrossD2.R pastecs/R/print.summary.escouf.R pastecs/R/reglin.R pastecs/R/identify.escouf.R pastecs/R/print.summary.regul.R pastecs/R/extract.tsd.R pastecs/R/summary.turnogram.R pastecs/R/extract.abund.R pastecs/R/last.R pastecs/R/trend.test.R pastecs/R/print.turnpoints.R pastecs/R/lines.regul.R pastecs/R/lines.turnpoints.R pastecs/R/plot.regul.R pastecs/R/stat.slide.R pastecs/R/regul.adj.R pastecs/R/regul.R pastecs/R/tsd.R pastecs/R/specs.tsd.R pastecs/R/specs.regul.R pastecs/R/plot.turnogram.R pastecs/R/plot.turnpoints.R pastecs/R/plot.escouf.R pastecs/R/abund.R pastecs/R/print.tsd.R pastecs/R/print.summary.abund.R pastecs/R/decmedian.R pastecs/R/print.turnogram.R pastecs/R/summary.escouf.R pastecs/R/hist.regul.R pastecs/R/disjoin.R pastecs/R/vario.R pastecs/R/print.specs.regul.R pastecs/R/print.summary.tsd.R pastecs/R/regconst.R pastecs/R/deccensus.R pastecs/R/turnogram.R pastecs/R/regarea.R pastecs/R/plot.stat.slide.R pastecs/R/extract.turnogram.R pastecs/R/print.specs.tsd.R pastecs/R/lines.stat.slide.R pastecs/R/specs.R pastecs/R/is.tseries.R pastecs/R/decaverage.R pastecs/R/print.abund.R pastecs/R/local.trend.R pastecs/R/summary.regul.R pastecs/R/regul.screen.R pastecs/R/yearstodays.R pastecs/R/daystoyears.R pastecs/R/decreg.R pastecs/R/identify.abund.R pastecs/R/escouf.R pastecs/R/buysbal.R pastecs/R/AutoD2.R pastecs/R/decdiff.R pastecs/R/plot.tsd.R pastecs/R/plot.abund.R pastecs/R/identify.turnogram.R pastecs/R/GetUnitText.R pastecs/R/extract.R pastecs/R/extract.escouf.R
pastecs/R/regspline.R
pastecs/R/print.regul.R pastecs/R/stat.pen.R pastecs/R/tseries.R pastecs/R/summary.abund.R pastecs/R/lines.abund.R pastecs/R/decloess.R pastecs/R/summary.tsd.R pastecs/R/print.summary.turnogram.R pastecs/R/disto.R pastecs/R/stat.desc.R pastecs/R/decevf.R pastecs/R/print.escouf.R pastecs/R/pennington.R pastecs/R/identify.regul.R pastecs/R/extract.regul.R
pastecs/MD5
pastecs/DESCRIPTION
pastecs/man
pastecs/man/stat.slide.Rd pastecs/man/regul.adj.Rd pastecs/man/tsd.Rd pastecs/man/last.Rd pastecs/man/vario.Rd pastecs/man/disto.Rd pastecs/man/turnogram.Rd pastecs/man/disjoin.Rd pastecs/man/decmedian.Rd pastecs/man/decaverage.Rd pastecs/man/pennington.Rd pastecs/man/marbio.Rd pastecs/man/specs.Rd pastecs/man/turnpoints.Rd pastecs/man/regul.screen.Rd pastecs/man/first.Rd pastecs/man/decloess.Rd pastecs/man/AutoD2.Rd pastecs/man/bnr.Rd pastecs/man/deccensus.Rd pastecs/man/regspline.Rd pastecs/man/match.tol.Rd pastecs/man/abund.Rd pastecs/man/reglin.Rd pastecs/man/regul.Rd pastecs/man/decdiff.Rd pastecs/man/decreg.Rd pastecs/man/regconst.Rd pastecs/man/releve.Rd pastecs/man/stat.desc.Rd pastecs/man/trend.test.Rd pastecs/man/gleissberg.table.Rd pastecs/man/buysbal.Rd pastecs/man/stat.pen.Rd pastecs/man/marphy.Rd pastecs/man/is.tseries.Rd pastecs/man/pgleissberg.Rd pastecs/man/regarea.Rd pastecs/man/local.trend.Rd pastecs/man/decevf.Rd pastecs/man/tseries.Rd pastecs/man/escouf.Rd pastecs/man/extract.Rd pastecs/man/GetUnitText.Rd pastecs/man/daystoyears.Rd

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