Files in penetrance
Methods for Penetrance Estimation in Family-Based Studies
MD5
README.md
NAMESPACE
DESCRIPTION
R/penetrance-package.R
R/mhChain.R
R/docData.R
R/mhLoglikehood.r
R/data.R
R/imputeAges.R
R/outputHelpers.R
R/priorElicitation.R
R/penetranceMain.R
R/helpers.R
inst/doc/using_penetrance.Rmd
inst/doc/simulation_study.R
inst/doc/simulation_study.html
inst/doc/simulation_study.Rmd
inst/doc/using_penetrance.html
inst/doc/simulation_study_real.Rmd
inst/doc/simulation_study_real.R
inst/doc/simulation_study_real.html
inst/doc/using_penetrance.R
build/vignette.rds
vignettes/using_penetrance.Rmd
vignettes/simulation_study.Rmd
vignettes/simulation_study_real.Rmd
data/simulated_families.RData
data/out_sim.RData
data/test_fam2.RData
man/imputeUnaffectedAges.Rd
man/printRejectionRates.Rd
man/plot_trace.Rd
man/lik_noSex.Rd
man/penetrance.Rd
man/simulated_families.Rd
man/plot_pdf.Rd
man/absValue.Rd
man/mhLogLikelihood_clipp.Rd
man/test_fam2.Rd
man/drawBaseline.Rd
man/makePriors.Rd
man/calculateNCPen.Rd
man/risk_proportion_default.Rd
man/imputeAgesInit.Rd
man/generate_density_plots.Rd
man/validate_weibull_parameters.Rd
man/distribution_data_default.Rd
man/plot_penetrance.Rd
man/combine_chains_noSex.Rd
man/generate_summary.Rd
man/calculateEmpiricalDensity.Rd
man/combine_chains.Rd
man/plot_loglikelihood.Rd
man/prior_params_default.Rd
man/calculateBaseline.Rd
man/lik.fn.Rd
man/out_sim.Rd
man/imputeAges.Rd
man/plot_acf.Rd
man/mhLogLikelihood_clipp_noSex.Rd
man/drawEmpirical.Rd
man/baseline_data_default.Rd
man/calculate_weibull_parameters.Rd
man/apply_burn_in.Rd
man/generate_summary_noSex.Rd
man/transformDF.Rd
man/mhChain.Rd
man/apply_thinning.Rd
