pensim: Simulation of high-dimensional data and parallelized repeated penalized regression

Simulation of continuous, correlated high-dimensional data with time to event or binary response, and parallelized functions for Lasso, Ridge, and Elastic Net penalized regression with repeated starts and two-dimensional tuning of the Elastic Net.

AuthorL. Waldron, M. Pintilie, M.-S. Tsao, F. A. Shepherd, C. Huttenhower*, I. Jurisica* (*equal contribution)
Date of publication2014-03-14 11:32:43
MaintainerLevi Waldron <lwaldron.research@gmail.com>
LicenseGPL (>= 2)
Version1.2.9

View on CRAN

Files

pensim
pensim/inst
pensim/inst/CITATION
pensim/inst/doc
pensim/inst/doc/pensim.R
pensim/inst/doc/pensim.pdf
pensim/inst/doc/pensim.Rnw
pensim/tests
pensim/tests/opt.nested.crossval.checks.R
pensim/NAMESPACE
pensim/data
pensim/data/beer.survival.rda
pensim/data/beer.exprs.rda
pensim/data/datalist
pensim/Changelog
pensim/R
pensim/R/opt2D.R pensim/R/create.data.R pensim/R/scan.l1l2.R pensim/R/opt.nested.crossval.R pensim/R/opt.splitval.R pensim/R/opt1D.R
pensim/vignettes
pensim/vignettes/pensim.bib
pensim/vignettes/pensim.Rnw
pensim/MD5
pensim/build
pensim/build/vignette.rds
pensim/DESCRIPTION
pensim/man
pensim/man/opt1D.Rd pensim/man/opt.nested.crossval.Rd pensim/man/beer.exprs.Rd pensim/man/beer.survival.Rd pensim/man/scan.l1l2.Rd pensim/man/pensim-package.Rd pensim/man/create.data.Rd pensim/man/opt.splitval.Rd pensim/man/opt2D.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.