VariantScores: Compute variant scores.
In pgenlibr: PLINK 2 Binary (.pgen) Reader
VariantScores R Documentation
Compute variant scores.
Description
This function treats the data as diploid; divide by 2 to obtain scores
based on a haploid dosage matrix.
Usage
VariantScores(pgen, weights, variant_subset = NULL)
Arguments
pgen
Object returned by NewPgen().
weights
Sample weights.
variant_subset
Integer vector containing 1-based indexes of variants
to include in the dosage matrix. Optional; by default, all variants are
included.
Value
Numeric vector, containing product of sample-weight vector and the
specified subset of the dosage matrix.
pgenlibr documentation built on April 3, 2025, 6:21 p.m.
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| VariantScores | R Documentation |
Compute variant scores.
Description
This function treats the data as diploid; divide by 2 to obtain scores based on a haploid dosage matrix.
Usage
VariantScores(pgen, weights, variant_subset = NULL)
Arguments
pgen |
Object returned by NewPgen(). |
weights |
Sample weights. |
variant_subset |
Integer vector containing 1-based indexes of variants to include in the dosage matrix. Optional; by default, all variants are included. |
Value
Numeric vector, containing product of sample-weight vector and the specified subset of the dosage matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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