geneset.names: Print all geneset names in geneset list
In phantom: Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data
Description
Usage
Arguments
Examples
Description
This function allows user to print all the geneset names in the loaded geneset list such that user can find the specific query_geneset name for run.phantom funciton.
Usage
1
geneset.names(geneset_list = NULL)
Arguments
geneset_list
User provided genesets list loaded by load.geneset(). Phanotm package provids four geneset lists from different resources: kegg, reactome, emory geneset and baylor modules. These genesets can be obtained with data(), e.g. data(kegg.geneset)
Examples
1
2
3
4
5
## store all the geneset names in one vector
## Not run:
g.names = geneset.names(reactome.geneset)
## End(Not run)
phantom documentation built on May 2, 2019, 6:01 a.m.
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Description Usage Arguments Examples
Description
This function allows user to print all the geneset names in the loaded geneset list such that user can find the specific query_geneset name for run.phantom funciton.
Usage
1 | geneset.names(geneset_list = NULL)
|
Arguments
geneset_list |
User provided genesets list loaded by load.geneset(). Phanotm package provids four geneset lists from different resources: kegg, reactome, emory geneset and baylor modules. These genesets can be obtained with data(), e.g. data(kegg.geneset) |
Examples
1 2 3 4 5 | ## store all the geneset names in one vector
## Not run:
g.names = geneset.names(reactome.geneset)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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