phcfM: Modelling anthropogenic deforestation

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phcfM is an R package for modelling anthropogenic deforestation. It was initially developed to obtain REDD+ baseline scenarios of deforestation for the "programme holistique de conservation des forets a Madagascar" (from which the package is named after). Parameter inference is done in a hierarchical Bayesian framework. Markov chains Monte Carlo (MCMC) are coded in C++ using the Scythe statistical library to maximize computation efficiency.

Author
Ghislain Vieilledent <ghislain.vieilledent@cirad.fr>
Date of publication
2013-04-09 11:46:55
Maintainer
Ghislain Vieilledent <ghislain.vieilledent@cirad.fr>
License
GPL-3 | file LICENSE
Version
1.2
URLs

View on CRAN

Man pages

deforestation
Binary logistic regression with variable time-intervals...
demography
Gaussian mixed linear regression for modelling population...
invgamma
The Inverse Gamma Distribution
iwishart
The Inverse Wishart Distribution
logit
Generalized logit and inverse logit function
phcfM-package
Modelling anthropogenic deforestation in tropical forests
wishart
The Wishart Distribution

Files in this package

phcfM
phcfM/MD5
phcfM/R
phcfM/R/deforestation.R
phcfM/R/zzz.R
phcfM/R/hidden.R
phcfM/R/demography.R
phcfM/R/distributions.R
phcfM/R/logit.R
phcfM/DESCRIPTION
phcfM/COPYING
phcfM/inst
phcfM/inst/phcfM_1.2.pdf
phcfM/man
phcfM/man/deforestation.Rd
phcfM/man/demography.Rd
phcfM/man/invgamma.Rd
phcfM/man/phcfM-package.Rd
phcfM/man/iwishart.Rd
phcfM/man/logit.Rd
phcfM/man/wishart.Rd
phcfM/LICENSE
phcfM/src
phcfM/src/defs.h
phcfM/src/rtmvnorm.h
phcfM/src/rng.h
phcfM/src/logit_invlogit.h
phcfM/src/logit_invlogit.cc
phcfM/src/lapack.h
phcfM/src/Makevars
phcfM/src/demography_fixed.cc
phcfM/src/matrix_bidirectional_iterator.h
phcfM/src/matrix_random_access_iterator.h
phcfM/src/distributions.h
phcfM/src/algorithm.h
phcfM/src/matrix.h
phcfM/src/mersenne.h
phcfM/src/ide.h
phcfM/src/error.h
phcfM/src/deforestation.cc
phcfM/src/Makevars.in
phcfM/src/matrix_forward_iterator.h
phcfM/src/optimize.h
phcfM/src/demography_mixed.cc
phcfM/src/smath.h
phcfM/src/stat.h
phcfM/src/datablock.h
phcfM/src/la.h
phcfM/README.md
phcfM/NAMESPACE