phylepic-package: phylepic: Combined Visualisation of Phylogenetic and...
In phylepic: Combined Visualisation of Phylogenetic and Epidemiological Data
phylepic-package R Documentation
phylepic: Combined Visualisation of Phylogenetic and Epidemiological Data
Description
A collection of utilities and 'ggplot2' extensions to assist with visualisations in genomic epidemiology. This includes the 'phylepic' chart, a visual combination of a phylogenetic tree and a matched epidemic curve. The included 'ggplot2' extensions such as date axes binned by week are relevant for other applications in epidemiology and beyond. The approach is described in Suster et al. (2024) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1101/2024.04.02.24305229")}.
Author(s)
Maintainer: Carl Suster Carl.Suster@health.nsw.gov.au (ORCID)
Other contributors:
Western Sydney Local Health District, NSW Health [copyright holder]
See Also
Useful links:
phylepic documentation built on June 22, 2024, 9:46 a.m.
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| phylepic-package | R Documentation |
phylepic: Combined Visualisation of Phylogenetic and Epidemiological Data
Description
A collection of utilities and 'ggplot2' extensions to assist with visualisations in genomic epidemiology. This includes the 'phylepic' chart, a visual combination of a phylogenetic tree and a matched epidemic curve. The included 'ggplot2' extensions such as date axes binned by week are relevant for other applications in epidemiology and beyond. The approach is described in Suster et al. (2024) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1101/2024.04.02.24305229")}.
Author(s)
Maintainer: Carl Suster Carl.Suster@health.nsw.gov.au (ORCID)
Other contributors:
Western Sydney Local Health District, NSW Health [copyright holder]
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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