Files in phyloregion
Biogeographic Regionalization and Macroecology
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/nodepie.R
R/EDGE.R
R/sample2sparsematrix.R
R/fishnet.R
R/fitgom.R
R/hexcols_rescale.R
R/WeightedEndemism.R
R/plot_pie.R
R/counts.R
R/get_clades.R
R/phyloregion-package.R
R/functional_beta.R
R/clustering.algorithm.R
R/evol_distinct.R
R/mean_matrix.R
R/indicator_species.R
R/convert_input_data.R
R/phylo_beta.R
R/time_slice.R
R/community.R
R/collapse_range.R
R/sdm.R
R/phylo_builder.R
R/phyloregion.R
R/selectbylocation.R
R/coldspots.R
R/visualize_phyloregions.R
R/random_species.R
R/optimal_bioregion.R
R/PD_ses.R
R/pd.R
R/phylo_endemism.R
R/see_sparse.R
R/phylobeta_ses.R
R/utils.R
R/map_traits.R
R/arc_labels.R
inst/CITATION
inst/phyloregion_sticker.png
inst/doc/Benchmark.html
inst/doc/phyloregion-intro.html
inst/doc/phyloregion-intro.R
inst/doc/phyloregion-intro.Rmd
inst/doc/ed.html
inst/doc/ed.Rmd
inst/doc/Benchmark.Rmd
inst/ex/nigeria.json
inst/ex/Bombax.csv
inst/ex/IHfeb20.csv
inst/ex/sa.json
inst/ex/SR_Naija.json
inst/NGAplants/Chytranthus_gilletii.tif
inst/NGAplants/Indigofera_oubanguiensis.tif
inst/NGAplants/Grewia_barombiensis.tif
inst/NGAplants/Indigofera_berhautiana.tif
inst/NGAplants/Commelina_ramulosa.tif
inst/NGAplants/Dalechampia_ipomoeifolia.tif
inst/NGAplants/Cymbopogon_caesius.tif
inst/NGAplants/Indigofera_erecta.tif
inst/tinytest/test_phyloregion.R
build/vignette.rds
tests/tinytest.R
vignettes/benchmark-phylo_diversity-1.png
vignettes/benchmark-phylo_endemism-1.png
vignettes/benchmark-beta_diversity-1.png
vignettes/ed-evoldistinct-1.png
vignettes/workflow.png
vignettes/phyloregion.bib
vignettes/phyloregion-intro.Rmd
vignettes/benchmark-phylobeta-1.png
vignettes/ed.Rmd
vignettes/Benchmark.Rmd
data/africa.RData
man/phylobeta.Rd
man/fishnet.Rd
man/random_species.Rd
man/evol_distinct.Rd
man/select_linkage.Rd
man/arc_labels.Rd
man/match_phylo_comm.Rd
man/counts.Rd
man/unifrac.Rd
man/reexports.Rd
man/rast2comm.Rd
man/plot.sparse.Rd
man/long2sparse.Rd
man/selectbylocation.Rd
man/phylo_endemism.Rd
man/timeslice.Rd
man/map_trait.Rd
man/read.community.Rd
man/weighted_endemism.Rd
man/hexcols.Rd
man/mean_dist.Rd
man/phylobuilder.Rd
man/phyloregion-package.Rd
man/sdm.Rd
man/phyloregion.Rd
man/PD_ses.Rd
man/plot.phyloregion.Rd
man/beta_diss.Rd
man/get_clades.Rd
man/plot_pie.Rd
man/EDGE.Rd
man/PD.Rd
man/fitgom.Rd
man/collapse_range.Rd
man/indicators.Rd
man/africa.Rd
man/optimal_phyloregion.Rd
man/coldspots.Rd
man/functional_beta.Rd
man/phylobeta_ses.Rd
man/nodepie.Rd
man/figures/examples.png
man/figures/logo.png
