Description Usage Arguments Value References See Also Examples
PD
calculates Faith's (1992) phylogenetic diversity.
1 | PD(x, phy)
|
x |
a community matrix, i.e. an object of class matrix or Matrix. |
phy |
a phylogenetic tree (object of class phylo). |
a vector with the PD for all samples.
Faith, D.P. (1992) Conservation evaluation and phylogenetic diversity. Biological Conservation 61: 1–10.
read.community read.tree phylobeta_core
1 2 3 4 5 6 7 8 |
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