PD calculates Faith's (1992) phylogenetic diversity.
a community matrix, i.e. an object of class matrix or Matrix.
a phylogenetic tree (object of class phylo).
a vector with the PD for all samples.
Faith, D.P. (1992) Conservation evaluation and phylogenetic diversity. Biological Conservation 61: 1–10.
read.community read.tree phylobeta_core
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