phyloseqGraphTest-package: phyloseqGraphTest: Non-parametric graph-based testing for...

Description Details

Description

This package lets you test for differences between groups of samples with a graph-based permutation test.

Details

The main function in the package is graph_perm_test, which takes a phyloseq object.

The graph used in the test can be visualized using plot_test_network. The permutation distribution and the test statistic can be visualized with plot_permutations.


phyloseqGraphTest documentation built on May 2, 2019, 4:20 a.m.