Files in phylotypr
Classifying DNA Sequences to Taxonomic Groupings

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/phylotypr-package.R R/example.R R/write_fasta.R R/print_taxonomy.R R/kmers.R R/data.R R/read_fasta.R R/filter_taxonomy.R R/read_taxonomy.R

src/RcppExports.cpp

src/kmers.cpp

inst/CITATION

inst/WORDLIST

inst/doc/phylotypr.html

inst/doc/phylotypr.Rmd inst/doc/phylotypr.R

inst/extdata/miseq_sop.fasta.gz

build/vignette.rds

tests/testthat.R tests/testthat/test-filter_taxonomy.R tests/testthat/test-example.R tests/testthat/test-read_taxonomy.R tests/testthat/test-print_taxonomy.R tests/testthat/test-write_fasta.R tests/testthat/test-read_fasta.R tests/testthat/test-kmers.R vignettes/phylotypr.Rmd

data/trainset9_pds.rda

data/trainset9_rdp.rda

man/read_fasta.Rd man/classify_sequence.Rd man/build_kmer_database.Rd man/write_fasta.Rd man/phylotypr_example.Rd man/filter_taxonomy.Rd man/read_taxonomy.Rd man/print_taxonomy.Rd man/trainset9_rdp.Rd

man/figures/logo.png

man/figures/README-pressure-1.png

phylotypr documentation built on April 3, 2025, 5:51 p.m.

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